Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05495 and RBAM_033200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05495___ywrJ.1.9828.seq
# -bsequence pep-align/RBAM_033200___ywrJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05495___ywrJ-RBAM_033200___ywrJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05495___ywrJ-RBAM_033200___ywrJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05495___ywrJ
# 2: RBAM_033200___ywrJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 141/225 (62.7%)
# Similarity: 178/225 (79.1%)
# Gaps: 1/225 ( 0.4%)
# Score: 757.0
#
#
#=======================================
BSNT_05495___ 1 MKGLNQFLNTDVEVVISGDTRFVGTLIDIGQDIFVIFDGCNYLYIPLLHL 50
|.||::||:..|::.|||:|.|.|||:||||||.||.||..:||||||||
RBAM_033200__ 1 MAGLSRFLDKQVDIEISGNTTFSGTLLDIGQDIIVIHDGRTFLYIPLLHL 50
BSNT_05495___ 51 HQINKAKIMTSTEKPFLINPEDPMIEAETLAFSYRNTLNKVKGQFIEVYV 100
.::.........::|: ...:.|..|.:..:|||||||..:||:|.|::|
RBAM_033200__ 51 QRMTLTLPDEENKEPY-ARKKSPHPEKQEHSFSYRNTLQHIKGRFTEIFV 99
BSNT_05495___ 101 TGGRSIHGYVTNVLNDYIVFFSPVFKILFISMHHLKWFTPYSTEQTPYTL 150
||.||||||||:|||||.||||||:|.||||||||||.||||.|||||||
RBAM_033200__ 100 TGDRSIHGYVTSVLNDYFVFFSPVYKTLFISMHHLKWLTPYSDEQTPYTL 149
BSNT_05495___ 151 DNSQLPVVPSKVPLVRNFEEQIKKNIGELVIFDMGEVPEKVGLLKGVSNN 200
::|:|||||:.||||||||||:|:.||:|:|.|:|::|.|||||:.||:|
RBAM_033200__ 150 NSSELPVVPANVPLVRNFEEQLKRYIGKLIILDLGDIPNKVGLLQDVSDN 199
BSNT_05495___ 201 IIELINASGEPVIWKLNHLKTMHLP 225
|:||.||.|:.|.||||||||||||
RBAM_033200__ 200 ILELTNADGDTVFWKLNHLKTMHLP 224
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