Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04965 and RBAM_030420

See DNA alignment / Visit BSNT_04965 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence pep-align/BSNT_04965___fhuG.1.9828.seq
#    -bsequence pep-align/RBAM_030420___fhuG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04965___fhuG-RBAM_030420___fhuG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04965___fhuG-RBAM_030420___fhuG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04965___fhuG
# 2: RBAM_030420___fhuG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     275/336 (81.8%)
# Similarity:   308/336 (91.7%)
# Gaps:           0/336 ( 0.0%)
# Score: 1418.0
# 
#
#=======================================

BSNT_04965___      1 MKTKTNKPLIVMAVTFLLIVVVFFISLNLGVIKIAPLKTLQVFFGQGTAR     50
                     |..|:.|||.|||||||||.:|||||||:|||:||||.||:||||||.||
RBAM_030420__      1 MNVKSKKPLAVMAVTFLLICIVFFISLNMGVIRIAPLDTLRVFFGQGDAR     50

BSNT_04965___     51 DELVLFEFRLPRIILSLLVGAGISVAGAILQSVSQNELAEPGILGINAGG    100
                     |:||||||||||::|||||||||:|:|||.||||||:||||||||||||.
RBAM_030420__     51 DQLVLFEFRLPRMVLSLLVGAGIAVSGAIFQSVSQNDLAEPGILGINAGA    100

BSNT_04965___    101 SLAVVLFIYFFQGSASDLSFFGTFMLPFSALAGAILAAFLIYILAWKKGV    150
                     ||||||||:||||||.|||..||::||.||||||.|||.|||:|||||||
RBAM_030420__    101 SLAVVLFIFFFQGSAVDLSMAGTWLLPVSALAGAFLAALLIYVLAWKKGV    150

BSNT_04965___    151 TPIRLILVGIGVNAGFNALLLIFQLKMDPHDFMQAAVWISGSIWGANWNM    200
                     :|:||:|||||||||||||||||||||||.|||||.||||||||.|||.|
RBAM_030420__    151 SPVRLVLVGIGVNAGFNALLLIFQLKMDPRDFMQALVWISGSIWNANWKM    200

BSNT_04965___    201 IWAILPWIVILLLFTLYKARYLNIMQLGDQLATGLGTAVEKERRILLLAA    250
                     :.:||||:::||.|:||||||||::|||||||.||||.||||||:||::|
RBAM_030420__    201 VLSILPWLLVLLPFSLYKARYLNVLQLGDQLAAGLGTRVEKERRVLLMSA    250

BSNT_04965___    251 VTLAASCVAAAGGIAFLGLIAPHVARRLTGPRHQTLIPVSAFIGSFLFLL    300
                     |.|.|||||||||||||||||||:|||||||||||||||||.||:|||||
RBAM_030420__    251 VALTASCVAAAGGIAFLGLIAPHLARRLTGPRHQTLIPVSALIGAFLFLL    300

BSNT_04965___    301 ADTLARNVLAPSEIPVGLVISVLGAPYFIYLLMKAN    336
                     |||||||||||||:||||||||||||||:|||||..
RBAM_030420__    301 ADTLARNVLAPSEVPVGLVISVLGAPYFVYLLMKTK    336


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