Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04688 and RBAM_028920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence pep-align/BSNT_04688___yueB.1.9828.seq
# -bsequence pep-align/RBAM_028920___yueB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04688___yueB-RBAM_028920___yueB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04688___yueB-RBAM_028920___yueB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04688___yueB
# 2: RBAM_028920___yueB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1071
# Identity: 706/1071 (65.9%)
# Similarity: 829/1071 (77.4%)
# Gaps: 42/1071 ( 3.9%)
# Score: 3420.0
#
#
#=======================================
BSNT_04688___ 1 MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNED 50
||||||||||||:||:|||||||||||||||||.|:.:|:||||||||||
RBAM_028920__ 1 MTEQRKSLIKLIAAVVIILLLPVLFFRFIGDDPGKQKINATRQIAVVNED 50
BSNT_04688___ 51 TGVLSDEVKSDEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASK 100
.|:.:|| :||::|..|||||||.||.|||||||||||||||.|||:|
RBAM_028920__ 51 MGLQTDE---NEEEESVHFGKEVAAALGGRPDYSWTVVNRSAAENGLAAK 97
BSNT_04688___ 101 KYDAIVYIPSDFSKNILSYDKDHPQKATLEFSIQDNLNAVNKEKVQRELE 150
||||:|||||||||:||||||:.||||||.|:||.|||||||||||||||
RBAM_028920__ 98 KYDAVVYIPSDFSKDILSYDKERPQKATLTFNIQSNLNAVNKEKVQRELE 147
BSNT_04688___ 151 DAQKTMNKKMSALYWNFVSQKVDNIRGEFDKIVNKESEFQNVMYNFYKPS 200
||||:|||||||||||||||||:|:||:||||||||||||||||||||||
RBAM_028920__ 148 DAQKSMNKKMSALYWNFVSQKVNNVRGDFDKIVNKESEFQNVMYNFYKPS 197
BSNT_04688___ 201 SNDLAGEIKQQKDLIDELKKSMNEAQGTTKEKASTAEEAKNTLKEFIDTV 250
|||||||||:|||||||||||||||||..|||.::|:|||.|||:|.|||
RBAM_028920__ 198 SNDLAGEIKRQKDLIDELKKSMNEAQGAAKEKLTSADEAKTTLKDFADTV 247
BSNT_04688___ 251 ERYKEYQENQKKLLLAAQDSTQQQIRTGLDAIQAQQKANQFSERMSGLAT 300
||||:|||||||||:|||:..|:||.|||:||:|||.|||||..||||::
RBAM_028920__ 248 ERYKQYQENQKKLLMAAQEQNQKQITTGLNAIKAQQAANQFSTMMSGLSS 297
BSNT_04688___ 301 GIGQAKTQLGLTSLALKSAEQTRQGQVPLQEMGMKKIQEDMFSTFLERYE 350
||.||||||..|..||.:|:|.|:.|||.||.||..|| |..|:.|.
RBAM_028920__ 298 GINQAKTQLDQTGSALLAAQQVREAQVPDQERGMANIQ----SNLLDNYL 343
BSNT_04688___ 351 TQYTA-TKIQNLNQLQDKIVNLRPALIKPEED--DQKHDNSNEENNDKEE 397
|||.| .:.:.||.:|..:...||||..||:| |...|...||.. .||
RBAM_028920__ 344 TQYKAQARFETLNSIQTLMKRDRPALTVPEKDPGDDGSDEPKEEEK-PEE 392
BSNT_04688___ 398 DTTEEIKLDLEQQRDELNNVAAEIKDISEGLKEPELNNPT--MPGSEDPT 445
:...::|:||:.|||||..::|||..||:||||||..||. .||..|
RBAM_028920__ 393 EKPGDLKIDLDDQRDELKRISAEINHISDGLKEPEKENPAPEKPGQGD-- 440
BSNT_04688___ 446 NDDNTNNKNPTSGDQPTDGNDGSTDDSTQMNPEINNEADNQGQQNSSEKT 495
:.:|:.:.:|.:|..| |.||.|:|.| :.:|.:|:.|
RBAM_028920__ 441 DGENSGDTDPNNGTNP--GEDGKTEDGT------------KEEQPASDNT 476
BSNT_04688___ 496 NDLNGKTETTAQSKAALRIIQLADENDGSQVDDSKNE--SDISIAKKRLN 543
.|...||..|| .||..:...||| .....:||:.: :|||.||:|||
RBAM_028920__ 477 GDQEPKTVQTA--TAAKNVTPSADE-PADDPNDSEGDGGTDISEAKERLN 523
BSNT_04688___ 544 AAAEQIQKIEEELKEKQEEHNSKVEKRIEKLDKEIKDLND---KVDSLNI 590
.|||:||:||:||:|||:.||.:::||::.||:||:.|.. ||:....
RBAM_028920__ 524 QAAERIQQIEKELEEKQQTHNEELKKRLDALDEEIQGLKKQIAKVEERAE 573
BSNT_04688___ 591 KI-NDLTSKFNDINDQFNKSSLLISEKEKEILKI-LRNNGEKDRLEQLSS 638
|: .||..........||....:|...|:.||.. ..:.|.|..|||
RBAM_028920__ 574 KLQEDLEKTVEKREQDFNTVYRMIVRTEQNILNYPSLDGGRKSALEQ--- 620
BSNT_04688___ 639 VFTNTVDTKNVSDLMKYYNYLYLYEKTLTGSLDVGSMSLLSRDAIQGQQG 688
:|...::||.:||||.|||.|.|||.||..|||.||:..:....::.|||
RBAM_028920__ 621 IFAADINTKEISDLMSYYNDLSLYEATLYHSLDAGSLPDVKNRVLKAQQG 670
BSNT_04688___ 689 NVKSILALSPAESASWEALKNNTMQTDEDINSFIDGMTKFAGDYSGFIRD 738
.|:::||:.|.|:||||.||||.|||||||::||.|||:|:.:||.:|||
RBAM_028920__ 671 EVQTVLAIKPVETASWENLKNNKMQTDEDISNFIKGMTEFSDNYSTYIRD 720
BSNT_04688___ 739 SQAGVLDELTKISESAAKASEQLVTGATQESATFSNDGLSGTMALSVQDT 788
.||||||||..||:||||||:||..||.||:|.||.|||:|||||..|||
RBAM_028920__ 721 EQAGVLDELASISDSAAKASDQLAEGAVQEAAAFSGDGLTGTMALGAQDT 770
BSNT_04688___ 789 VGQEVLQMSDMMGSLSDRQSGIIDYTTNMQQSVNDVQAKADTLNNNWGKN 838
||:|||||||.||.||:||||||.||.||||||||||.||||||:|||||
RBAM_028920__ 771 VGREVLQMSDTMGHLSERQSGIISYTDNMQQSVNDVQQKADTLNSNWGKN 820
BSNT_04688___ 839 VASTKLVRNDVYGILGNTLVDGQNNGYVYDYLANPLKISGEVPEEKIQTV 888
|.||||:||||||||||.|||||.||||||||||||||||||||:::|.|
RBAM_028920__ 821 VNSTKLIRNDVYGILGNALVDGQENGYVYDYLANPLKISGEVPEDRVQNV 870
BSNT_04688___ 889 PPVVILVIVLISSLLIGYFSSYYQNAPLLVKGALFGILNILVGLMISLFG 938
||||||||||||||||||||||||.|||||||||||||||:|||||||||
RBAM_028920__ 871 PPVVILVIVLISSLLIGYFSSYYQQAPLLVKGALFGILNIMVGLMISLFG 920
BSNT_04688___ 939 LNIYSLPDDQTIKWSVFTILLLVASSAFIRTAFRFGSIPGWVASAAMILF 988
||||||||||||||||||||||.|||||||.||.||||.||:||:|:|||
RBAM_028920__ 921 LNIYSLPDDQTIKWSVFTILLLAASSAFIRAAFVFGSITGWIASSALILF 970
BSNT_04688___ 989 YVAPLIDLIMPNFTFEDPVSKVYIDIQYGTGHLFTMGITVLLIITVIAVA 1038
|||||||||||||||:.|||||||||||||||||.||:|||.|||:||.|
RBAM_028920__ 971 YVAPLIDLIMPNFTFDSPVSKVYIDIQYGTGHLFAMGVTVLAIITLIAAA 1020
BSNT_04688___ 1039 LPLIIRLMAEHTAESDETYEA 1059
|||:|||.||.|.|||::|||
RBAM_028920__ 1021 LPLVIRLFAEKTEESDQSYEA 1041
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