Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04485 and RBAM_027800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence pep-align/BSNT_04485___menD.1.9828.seq
# -bsequence pep-align/RBAM_027800___menD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04485___menD-RBAM_027800___menD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04485___menD-RBAM_027800___menD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04485___menD
# 2: RBAM_027800___menD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity: 468/579 (80.8%)
# Similarity: 518/579 (89.5%)
# Gaps: 1/579 ( 0.2%)
# Score: 2532.0
#
#
#=======================================
BSNT_04485___ 1 MTVNPITHYIGSFIDEFALSGITDAVVCPGSRSTPLAVLCAAHPDISVHV 50
|| ||||||||||||||||||:|||||||||||||||||.||||||.||:
RBAM_027800__ 1 MT-NPITHYIGSFIDEFALSGVTDAVVCPGSRSTPLAVLAAAHPDIQVHI 49
BSNT_04485___ 51 QIDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAVVEAHYSRVPII 100
|||||||||||||||||:||||:||||||||||||||||:||||||||:|
RBAM_027800__ 50 QIDERSAGFFALGLAKARQRPVMLICTSGTAAANFYPAVIEAHYSRVPLI 99
BSNT_04485___ 101 VLTADRPHELREVGAPQAINQHFLFGNFVKFFTDSALPEESPQMLRYIRT 150
||||||||||||||||||||||||||||||||||||||||:||||.||||
RBAM_027800__ 100 VLTADRPHELREVGAPQAINQHFLFGNFVKFFTDSALPEENPQMLSYIRT 149
BSNT_04485___ 151 LASRAAGEAQKRPMGPVHVNVPLREPLMPDLSDEPFGRMRTGRHVSVKTG 200
||.||..||.||||||||:|||||||||||||..||.|||.||||||.||
RBAM_027800__ 150 LAGRAVSEAGKRPMGPVHINVPLREPLMPDLSAAPFERMRKGRHVSVTTG 199
BSNT_04485___ 201 TQSVDRESLSDVAEMLAEAEKGMIVCGELHSDVDKENIITLSKALQYPIL 250
.||.|::||..:.|.||..|:|||||||:|.:.:|:.||.|::.||:|||
RBAM_027800__ 200 IQSADQDSLCHITERLAGTERGMIVCGEIHGEAEKQQIIALAEMLQFPIL 249
BSNT_04485___ 251 ADPLSNLRNGVHDKSTVIDAYDSFLKDDKLKRKLRPDVVIRFGPMPVSKP 300
||||||||||.|||:.:||||||||||:.:|..||||.||||||||||||
RBAM_027800__ 250 ADPLSNLRNGKHDKTLIIDAYDSFLKDEAIKEALRPDAVIRFGPMPVSKP 299
BSNT_04485___ 301 VFLWLKDDPAIQQIVIDEDGGWRDPTQVSAHMIHCNASVFAEEIMAGLTA 350
:||||:|||||:|.::|||||||||||..||||||:.|||.|.:.:..|.
RBAM_027800__ 300 LFLWLRDDPAIEQFIVDEDGGWRDPTQAGAHMIHCHPSVFLEAVRSAETG 349
BSNT_04485___ 351 ARSSEWLEKWQFVNGRFREHLQTISSEDVSFEGNLYRILQHLVPENSSLF 400
.|.|.|||||||||.|||.|||..|.:|:|||||:||.|||||||.||:|
RBAM_027800__ 350 KRPSGWLEKWQFVNERFRSHLQAASMDDLSFEGNVYRQLQHLVPEGSSIF 399
BSNT_04485___ 401 VGNSMPIRDVDTFFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEGTKAPV 450
|||||||||||||||||||.||:|:||||||||||||||||:||||||||
RBAM_027800__ 400 VGNSMPIRDVDTFFEKQDRSFRVYANRGANGIDGVVSSAMGLCEGTKAPV 449
BSNT_04485___ 451 TLVIGDLSFYHDLNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTH 500
||||||||||||||||||||||||||||||:|||||||||||||||:|||
RBAM_027800__ 450 TLVIGDLSFYHDLNGLLAAKKLGIPLTVILINNDGGGIFSFLPQASDKTH 499
BSNT_04485___ 501 FEDLFGTPTGLDFKHAAALYGGTYSCPASWDEFKTAYAPQADKPGLHLIE 550
||:||||||||||:||||||||||:||.:|:.||.||.|||||||||:||
RBAM_027800__ 500 FEELFGTPTGLDFRHAAALYGGTYTCPETWEAFKDAYQPQADKPGLHIIE 549
BSNT_04485___ 551 IKTDRQSRVQLHRDMLNEAVREVKKQWEL 579
:||||.||||.|||:|..|||||||:|:|
RBAM_027800__ 550 LKTDRTSRVQFHRDLLQAAVREVKKEWKL 578
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