Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03099 and RBAM_026610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03099___yokH.1.9828.seq
# -bsequence pep-align/RBAM_026610___yokH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03099___yokH-RBAM_026610___yokH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03099___yokH-RBAM_026610___yokH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03099___yokH
# 2: RBAM_026610___yokH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 92/212 (43.4%)
# Similarity: 130/212 (61.3%)
# Gaps: 38/212 (17.9%)
# Score: 462.0
#
#
#=======================================
BSNT_03099___ 1 MEFERLLLKGNKGVMYVTNFVHKTVNGLKSLLDEKGAIQLFCSEGDTMEC 50
:..||.||:.|||.|:||||.:::..:||..:|.
RBAM_026610__ 1 ----------------MAVFVEKTLQGLKELIDEKGRLKILGNEGALLET 34
BSNT_03099___ 51 LVTFSPDKATLNDIQSFEAKHQITLPEDYQKFMTLHNGAKIFEILSDGEN 100
...|... ||..:|:|||.|.:::|||||:.|:.|||||:||::|..|||
RBAM_026610__ 35 ECIFFKG-ATDLEIESFEKKIKVSLPEDYKTFLKLHNGARIFDLLFYGEN 83
BSNT_03099___ 101 IGGGLQLFSLEEIEEELKYEDLFEDING------IPIGYLLEECHLMIDK 144
:||||.:.::||||:.:: || ||:.:||:.|:|:|||
RBAM_026610__ 84 VGGGLHILNVEEIEKYMQ--------NGFLKPQFIPVAHLLDGCYLLIDK 125
BSNT_03099___ 145 DKVNQGDPNYLYIFESGLEYNPLNLNFEKFLDRYILANGEPFWDWRYYTA 194
.|::. |||||: |...:||.|:.||||.||||||::.|..||:|..|||
RBAM_026610__ 126 TKMST-DPNYLW-FRGFVEYEPMQLNFEIFLDRYIMSQGANFWEWNIYTA 173
BSNT_03099___ 195 ENYYRTR----- 201
||||||.
RBAM_026610__ 174 ENYYRTHQGDED 185
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