Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04297 and RBAM_026440

See DNA alignment / Visit BSNT_04297 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04297___ytfI.1.9828.seq
#    -bsequence pep-align/RBAM_026440___ytfI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04297___ytfI-RBAM_026440___ytfI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04297___ytfI-RBAM_026440___ytfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04297___ytfI
# 2: RBAM_026440___ytfI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     148/237 (62.4%)
# Similarity:   182/237 (76.8%)
# Gaps:          11/237 ( 4.6%)
# Score: 749.0
# 
#
#=======================================

BSNT_04297___      1 MLLEEVKNMVYVLTA-ILILIGIVLLLRMKIHVALEYLHADDNDKLTLKI     49
                             |.|...| |||||...||:|||||:..||||..||||||.||
RBAM_026440__      1 --------MGYAAAAVILILILAWLLMRMKIHLTFEYLHDKDNDKLTFKI     42

BSNT_04297___     50 TALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMK-KSSGKKKITQNDV     98
                     :||:||||||||:|.||||.||.::|:||.|:|:|| :...|||||..||
RBAM_026440__     43 SALYGLIRIKKTLPVIKVNSEDASIDVKQNTKSEMKGQKKEKKKITYEDV     92

BSNT_04297___     99 QQSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVTGVL    148
                     :|||::|||:||||.::|:|:|||||.:.:||.||||||||:||||||:.
RBAM_026440__     93 KQSIHRIEMILHQVFQMRQIAASFLAGVRVTKFEWVTVIGIKDAAVTGIA    142

BSNT_04297___    149 TGAVWGVKGGIAAMLYDHLDFVNKPVYEVIPSFQVPVSKTHFQCIFFFRF    198
                     .|.:|.||||:.|||||||.|:::||.|||||||||.||||.||||||||
RBAM_026440__    143 AGGLWAVKGGLTAMLYDHLRFIHEPVCEVIPSFQVPASKTHLQCIFFFRF    192

BSNT_04297___    199 GHAMLAAFKFVKYGRE-LSVLKKNPSARMTSKNDSSV    234
                     ||.:.||||.:||||. ||:::|.....:.|||||||
RBAM_026440__    193 GHLIGAAFKLLKYGRNGLSIIRKKQPVPVASKNDSSV    229


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