Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04296 and RBAM_026430

See DNA alignment / Visit BSNT_04296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04296___ytfJ.1.9828.seq
#    -bsequence pep-align/RBAM_026430___ytfJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04296___ytfJ-RBAM_026430___ytfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04296___ytfJ-RBAM_026430___ytfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04296___ytfJ
# 2: RBAM_026430___ytfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     122/151 (80.8%)
# Similarity:   135/151 (89.4%)
# Gaps:           5/151 ( 3.3%)
# Score: 646.0
# 
#
#=======================================

BSNT_04296___      1 MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026430__      1 MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFA     50

BSNT_04296___     51 AGGSEFGGKPAEKKSEDDETREQKLPFGGGSGGGVSITPIAFLIVGSTGI    100
                     |||||||||||||:::|||.:|||||||||||||||||||||||||:.|:
RBAM_026430__     51 AGGSEFGGKPAEKRTDDDERKEQKLPFGGGSGGGVSITPIAFLIVGTNGV    100

BSNT_04296___    101 RMLHLDENTHLIEKILDAAPQTLERIQQMFKKNNKNQGQGQNQNQMNNMN    150
                     ||||||||||||:|:||:||||:||||.|||||.|.:.|.:....:    
RBAM_026430__    101 RMLHLDENTHLIDKLLDSAPQTIERIQHMFKKNEKGRNQKRTDIDL----    146

BSNT_04296___    151 Y    151
                      
RBAM_026430__    146 -    146


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