Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04284 and RBAM_026360

See DNA alignment / Visit BSNT_04284 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04284.1.9828.seq
#    -bsequence pep-align/RBAM_026360___ytzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04284-RBAM_026360___ytzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04284-RBAM_026360___ytzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04284
# 2: RBAM_026360___ytzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 45
# Identity:      29/45 (64.4%)
# Similarity:    38/45 (84.4%)
# Gaps:           4/45 ( 8.9%)
# Score: 149.5
# 
#
#=======================================

BSNT_04284         1 MMKKEPERYIYDEQESQETTRLISEAYQSGYVDMPDQESSSPAE-     44
                      |:||.:||||||:||:||.|||||||:||||.|  :|:|:|:| 
RBAM_026360__      1 -MRKEQDRYIYDEKESEETARLISEAYESGYVGM--EEASAPSEN     42


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