Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04052 and RBAM_024950

See DNA alignment / Visit BSNT_04052 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_04052___pheA.1.9828.seq
#    -bsequence pep-align/RBAM_024950___pheA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04052___pheA-RBAM_024950___pheA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04052___pheA-RBAM_024950___pheA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04052___pheA
# 2: RBAM_024950___pheA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     240/285 (84.2%)
# Similarity:   263/285 (92.3%)
# Gaps:           0/285 ( 0.0%)
# Score: 1278.0
# 
#
#=======================================

BSNT_04052___      1 MKVGYLGPAATFTHLAVSSCFQNGAEHVAYRTIPECIDAAVAGEVDFAFV     50
                     ||||||||.||||||||||||||......|:|||.|:|||||||||.|||
RBAM_024950__      1 MKVGYLGPEATFTHLAVSSCFQNSVTQAPYQTIPACMDAAVAGEVDLAFV     50

BSNT_04052___     51 PLENALEGSVNLTIDYLIHEQPLPIVGEMTLPIHQHLLVHPSRENAWKEL    100
                     |||||||||||||||||||||||.|||||||||||||||||||||.||:|
RBAM_024950__     51 PLENALEGSVNLTIDYLIHEQPLAIVGEMTLPIHQHLLVHPSRENEWKKL    100

BSNT_04052___    101 DKIYSHSHAIAQCHKFLHRHFPSVPYEYANSTGAAAKFVSDHPELNIGVI    150
                     :||||||||||||||||||||.|||||||.|||||||:||:|.:|.||||
RBAM_024950__    101 EKIYSHSHAIAQCHKFLHRHFSSVPYEYAKSTGAAAKYVSEHSDLPIGVI    150

BSNT_04052___    151 ANDMAASTYELKIVKRDIQDYRDNHTRFVILSPDENISFEVNSKLSSRPK    200
                     ||:|||:||.|.|||||||||:|||||||||||::::|||||:|||||||
RBAM_024950__    151 ANEMAAATYGLSIVKRDIQDYQDNHTRFVILSPEKDVSFEVNAKLSSRPK    200

BSNT_04052___    201 TTLMVMLPQDDQSGALHRVLSAFSWRNLNLSKIESRPTKTGLGHYFFIID    250
                     ||:||.|||||||||||||||||||||||||||||||||||||:||||||
RBAM_024950__    201 TTMMVTLPQDDQSGALHRVLSAFSWRNLNLSKIESRPTKTGLGNYFFIID    250

BSNT_04052___    251 IEKAFDDVLIPGAMQELEALGCKVRLLGAYQSYQL    285
                     ||:|.|.||||||:||:|||||:|:|||.||||.:
RBAM_024950__    251 IEQAMDQVLIPGAVQEMEALGCRVKLLGTYQSYSI    285


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