Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03977 and RBAM_024510

See DNA alignment / Visit BSNT_03977 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:17
# Commandline: needle
#    -asequence pep-align/BSNT_03977___alaS.1.9828.seq
#    -bsequence pep-align/RBAM_024510___alaS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03977___alaS-RBAM_024510___alaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03977___alaS-RBAM_024510___alaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: RBAM_024510___alaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 878
# Identity:     778/878 (88.6%)
# Similarity:   829/878 (94.4%)
# Gaps:           0/878 ( 0.0%)
# Score: 4073.0
# 
#
#=======================================

BSNT_03977___      1 MKHLTSAEVRQMFLDFFKEKGHAVEPSASLVPHEDPSLLWINSGVATLKK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024510__      1 MKHLTSAEVRQMFLDFFKEKGHAVEPSASLVPHEDPSLLWINSGVATLKK     50

BSNT_03977___     51 YFDGRVVPENPRIVNAQKAIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_024510__     51 YFDGRVVPENPRIVNAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100

BSNT_03977___    101 KEEAITWAWEFLTSDKWIGFDKELLSVTVHPEDEEAYEFWAKKIGIPEER    150
                     ||||||||||||||:||||||.|||||||||||||||..||:|||:||||
RBAM_024510__    101 KEEAITWAWEFLTSEKWIGFDPELLSVTVHPEDEEAYTLWAEKIGVPEER    150

BSNT_03977___    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGEAYGNDPEDPELYPGGENDRYLE    200
                     ||||||||||||||||||||||||||||.|||||.|.|||||||||||||
RBAM_024510__    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGEKYGNDPSDSELYPGGENDRYLE    200

BSNT_03977___    201 VWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLF    250
                     |||||||||||||||||||||||||||||||||||||||:|.||||||||
RBAM_024510__    201 VWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQDVSTNFDTDLF    250

BSNT_03977___    251 VPIIKATESISGETYGKDNVKDTAFKVIADHIRTVAFAVSDGALPSNEGR    300
                     :|||:|||.|||:.||||.|||||||||||||||||||||||||||||||
RBAM_024510__    251 MPIIEATERISGDAYGKDAVKDTAFKVIADHIRTVAFAVSDGALPSNEGR    300

BSNT_03977___    301 GYVLRRLLRRAVRYAKTINIHRPFMFDLVPVVAEIMADFYPEVKEKADFI    350
                     |||||||||||||||||:.|.||||::|||.||.||..||||||||.:||
RBAM_024510__    301 GYVLRRLLRRAVRYAKTLGISRPFMYELVPTVAGIMDAFYPEVKEKQEFI    350

BSNT_03977___    351 AKVIKTEEERFHETLNEGLAILSEMIKKEKDKGSSVISGADVFKLYDTYG    400
                     |||||||||||||||||||||||::|||||:|||.:|||.||||||||||
RBAM_024510__    351 AKVIKTEEERFHETLNEGLAILSDVIKKEKEKGSGIISGKDVFKLYDTYG    400

BSNT_03977___    401 FPVELTEEYAEDENMTVDHEGFEEEMNQQRERARNARQDVGSMQVQGGAL    450
                     |||||||||||||.|||||:|||.||.:||||||||||||||||||||||
RBAM_024510__    401 FPVELTEEYAEDEQMTVDHKGFEAEMEKQRERARNARQDVGSMQVQGGAL    450

BSNT_03977___    451 RDVTDESTFVGYSQTKADANIIVLLQDGQLIEEAYEGESVQIILDETPFY    500
                     ||:|.||||||||..||:|.:|.||.|||||.||:||::|||:||:||||
RBAM_024510__    451 RDITAESTFVGYSAVKAEAKVIELLHDGQLISEAHEGDTVQILLDKTPFY    500

BSNT_03977___    501 AESGGQIGDKGYLRSEQAVVRIKDVQKAPNGQHVHEGVVESGTVQKGLHV    550
                     |||||||||:|.||||||||.||||:|||||||||||.|:|||:|||..|
RBAM_024510__    501 AESGGQIGDRGVLRSEQAVVTIKDVKKAPNGQHVHEGTVDSGTIQKGASV    550

BSNT_03977___    551 TAEVEDHMRSGVIKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDF    600
                     ||||||.|||||:|||||||||||||||||||||||||||||||||||||
RBAM_024510__    551 TAEVEDQMRSGVVKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDF    600

BSNT_03977___    601 SHFGQVTKEELEQIERIVNEKIWASIPVSIDLKPIAEAKEMGAMALFGEK    650
                     ||||||||||||:||.|||||||.||||:||||||.||||||||||||||
RBAM_024510__    601 SHFGQVTKEELERIEGIVNEKIWESIPVAIDLKPINEAKEMGAMALFGEK    650

BSNT_03977___    651 YGDIVRVVQVGDYSLELCGGCHVRNTAEIGLFKIVSESGIGAGTRRIEAV    700
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_024510__    651 YGDIVRVVQVGDYSLELCGGCHVTNTAEIGLFKIVSESGIGAGTRRIEAV    700

BSNT_03977___    701 TGQGAYVEMNSQISVLKQTADELKTNIKEVPKRVAALQAELKEAQRENES    750
                     ||:|||.|||||:|:|:..|||||:|:|:||||:.:||||||||||||||
RBAM_024510__    701 TGKGAYQEMNSQLSLLQHAADELKSNVKDVPKRIQSLQAELKEAQRENES    750

BSNT_03977___    751 LLAKLGNVEAGAILSKVKEVDGVNVLAAKVNAKDMNHLRTMVDELKAKLG    800
                     ||:|||||||||||||||::.||.|||.|||||||||||||||:||||||
RBAM_024510__    751 LLSKLGNVEAGAILSKVKDIGGVKVLAEKVNAKDMNHLRTMVDDLKAKLG    800

BSNT_03977___    801 SAVIVLGAVQNDKVNISAGVTKDLIEKGLHAGKLVKQAAEVCGGGGGGRP    850
                     ||||:||||||:|||:|||||||||||||||||:||||||||||||||||
RBAM_024510__    801 SAVIILGAVQNEKVNLSAGVTKDLIEKGLHAGKMVKQAAEVCGGGGGGRP    850

BSNT_03977___    851 DMAQAGGKQPEKLEEALASVEDWVKSVL    878
                     ||||||||.||||||||||..||:||||
RBAM_024510__    851 DMAQAGGKHPEKLEEALASAVDWIKSVL    878


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03977 and RBAM_024510

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
