Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03809 and RBAM_023870

See DNA alignment / Visit BSNT_03809 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_03809___comEC.1.9828.seq
#    -bsequence pep-align/RBAM_023870___comEC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03809___comEC-RBAM_023870___comEC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03809___comEC-RBAM_023870___comEC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03809___comEC
# 2: RBAM_023870___comEC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     439/786 (55.9%)
# Similarity:   575/786 (73.2%)
# Gaps:          22/786 ( 2.8%)
# Score: 2328.0
# 
#
#=======================================

BSNT_03809___      1 ---------MAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIV     41
                              :||.||||||.||..|..:.||:|:||.|::||:....:||
RBAM_023870__      1 MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIIVKTKQYAPVIV     50

BSNT_03809___     42 CFFSFILFFVLYAVTDSQNVSSYRQGTYQFKAVIDTIPKIDGDRMSMMVE     91
                     |..||.::|.||.|.|:.||:.|:.|:|..:|||..|||:||.:||.::.
RBAM_023870__     51 CLVSFCVYFFLYTVCDAANVTRYQAGSYTEQAVITNIPKVDGAKMSAVIR    100

BSNT_03809___     92 TPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFD    141
                     |.|||||||:|:|:|..||..:..:||||.|..||:||:|.||||||.||
RBAM_023870__    101 THDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFD    150

BSNT_03809___    142 YNEYLYRQHIHWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPD    191
                     |.||||.|.|||.:||||||.|.:.:...:|:|::||::||...:.:|..
RBAM_023870__    151 YKEYLYSQQIHWLFSVTSIQQCEKSKQPLFKLLNIRKNLISIIRNHVPES    200

BSNT_03809___    192 SAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHVGILTAGLFYI    241
                     |||||:|||:|:||.:||::|:|||.||||||:||||:|||::||||||.
RBAM_023870__    201 SAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHVGLITAGLFYA    250

BSNT_03809___    242 MIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKW    291
                     :||:|:|||||.||||||||:|.:|:|||||||||:||.|.|:||:|||.
RBAM_023870__    251 LIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKR    300

BSNT_03809___    292 RVHSATAICLSYIVLLLFNPYHLFEAGFQLSFAVSFSLILSSSIFHQV-K    340
                     .:||:.|:.|||::|||||||.|::||||||||||.||||||||..:. |
RBAM_023870__    301 GIHSSAALSLSYLLLLLFNPYFLWQAGFQLSFAVSASLILSSSILKKAGK    350

BSNT_03809___    341 TSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPG    390
                     :.|..|.:.|.||:|.|||.|||||.|.|::|.||||:||||||..::|.
RBAM_023870__    351 SRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV    400

BSNT_03809___    391 AVAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPA    440
                     :|.|.|||.||...|...|..|||::...:..||..|.|::||::::.|.
RBAM_023870__    401 SVIGFLLLLLSRQMGECLFGMFDLVMKPVHDFITYAASVDLFTMIVSKPD    450

BSNT_03809___    441 PVLLFLFTVTIILLLMAIEKRSLSQLMVTGGICCTVMFLLFIYPCLSSEG    490
                     .:.|.|..|::..|..|:||....:|..:....|.|:..|...|..|..|
RBAM_023870__    451 FLSLLLLAVSVFTLFAALEKGGFLKLRKSALFFCAVLAYLICRPYFSPWG    500

BSNT_03809___    491 EVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGE    540
                     |.||:|||||||:|:.|||::|.|::||||.::|..|.|:||:||:|:||
RBAM_023870__    501 EADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGE    550

BSNT_03809___    541 KVLIPFLTAKGIKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFV    590
                     |||||||..||:|:|||||||||||||||||..|:|:|:||||::|.|||
RBAM_023870__    551 KVLIPFLNGKGVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFV    600

BSNT_03809___    591 SEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPGAPDPASKNN    640
                     .||||:.:|..|:|..:.:.|.||||.:...||||.||||.:.|..|||:
RBAM_023870__    601 KEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSPESSDGRSKND    650

BSNT_03809___    641 SSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGS    690
                     ||||||...||:||:||||||.:||.||:..:||:|||:||.||||||.|
RBAM_023870__    651 SSLVLWTVFGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSS    700

BSNT_03809___    691 TGEEFIQQLQPKTAIISAGKNNRYHHPHQEVLQLLQRHSIRVLRTDQNGT    740
                     |.|.|::||||:.|:|||||.|||||||:|||..|:.:|:.|||||.:||
RBAM_023870__    701 TSEAFLKQLQPEAALISAGKENRYHHPHEEVLDRLKAYSVNVLRTDISGT    750

BSNT_03809___    741 IQYRYKNRVGTFSVYPPYDTSDITETN---------    767
                     ||||:|...|||||:|||   ||.||.         
RBAM_023870__    751 IQYRFKKGAGTFSVFPPY---DIEETRAQEVKKTAD    783


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03809 and RBAM_023870

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
