Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03670 and RBAM_022930

See DNA alignment / Visit BSNT_03670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_03670___sinR.1.9828.seq
#    -bsequence pep-align/RBAM_022930___sinR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03670___sinR-RBAM_022930___sinR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03670___sinR-RBAM_022930___sinR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: RBAM_022930___sinR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     112/113 (99.1%)
# Similarity:   113/113 (100.0%)
# Gaps:           0/113 ( 0.0%)
# Score: 568.0
# 
#
#=======================================

BSNT_03670___      1 MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022930__      1 MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     50

BSNT_03670___     51 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022930__     51 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF    100

BSNT_03670___    101 LDYQKWRKSQKEE    113
                     ||||||||:||||
RBAM_022930__    101 LDYQKWRKAQKEE    113


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