Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03591 and RBAM_022400

See DNA alignment / Visit BSNT_03591 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:51
# Commandline: needle
#    -asequence pep-align/BSNT_03591___yqiQ.1.9828.seq
#    -bsequence pep-align/RBAM_022400___yqiQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03591___yqiQ-RBAM_022400___yqiQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03591___yqiQ-RBAM_022400___yqiQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03591___yqiQ
# 2: RBAM_022400___yqiQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     240/301 (79.7%)
# Similarity:   279/301 (92.7%)
# Gaps:           0/301 ( 0.0%)
# Score: 1248.0
# 
#
#=======================================

BSNT_03591___      1 MSWIVNKQSSQEELAGRFRKLMSAPDILQIPGAHDGMAALLAKEAGFSAI     50
                     |:|||:|||||||||.|||.||:|||:||||||||.||||:||:.||||:
RBAM_022400__      1 MTWIVSKQSSQEELAERFRTLMTAPDLLQIPGAHDAMAALIAKKTGFSAL     50

BSNT_03591___     51 YLSGAAYTASRGLPDLGIITSAEIAERAKDLVRAADLPLLVDIDTGFGGV    100
                     |||||||||||||||||||||||:|||.|||||::|||:|||||||||||
RBAM_022400__     51 YLSGAAYTASRGLPDLGIITSAEMAERVKDLVRSSDLPVLVDIDTGFGGV    100

BSNT_03591___    101 LNAARTAREMLEARVAAVQIEDQQLPKKCGHLNGKQLVPIKEMAQKIKAI    150
                     |||||||:||.|||.||||:|||:||||||||||||||||:||||||:|:
RBAM_022400__    101 LNAARTAKEMYEARAAAVQMEDQRLPKKCGHLNGKQLVPIEEMAQKIQAV    150

BSNT_03591___    151 KQAAPSLIVVARTDARAQEGLDAAIKRSEAYIEAGADAIFPEALQAENEF    200
                     |:|||:|:||||||||.||||:.|:||:.|||:|||||:||||||:|:||
RBAM_022400__    151 KRAAPTLLVVARTDARQQEGLEGALKRASAYIKAGADAVFPEALQSESEF    200

BSNT_03591___    201 RQFAERISVPLLANMTEFGKTPYYRADEFEDMGFHMVIYPVTSLRAAAKA    250
                     |.|:::||||:|||||||||||||.||||.|||..||||||||||.||||
RBAM_022400__    201 RAFSKQISVPILANMTEFGKTPYYSADEFSDMGCQMVIYPVTSLRTAAKA    250

BSNT_03591___    251 CERMFGLMKEHGSQKEGLHDMQTRKELYDTISYYDYEALDKTIAKTVLPD    300
                     .||:|.|:||.|||||||.|||||||||:||:|.|||.||::||||:|||
RBAM_022400__    251 FERIFRLLKEEGSQKEGLSDMQTRKELYETIAYDDYEELDQSIAKTILPD    300

BSNT_03591___    301 E    301
                     :
RBAM_022400__    301 D    301


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