Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03314 and RBAM_020400

See DNA alignment / Visit BSNT_03314 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03314___yppG.1.9828.seq
#    -bsequence pep-align/RBAM_020400___yppG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03314___yppG-RBAM_020400___yppG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03314___yppG-RBAM_020400___yppG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03314___yppG
# 2: RBAM_020400___yppG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:      74/144 (51.4%)
# Similarity:    88/144 (61.1%)
# Gaps:          19/144 (13.2%)
# Score: 362.0
# 
#
#=======================================

BSNT_03314___      1 ----MNGSSRSYPRQMGYYYPQHMQGYYQ---------QAAPGYLEQQLP     37
                         .......|.:..||:|||.:|...|         |..|.:.:.|.|
RBAM_020400__      1 MQWRAEPYQNMYQQPAGYFYPQQIQPLQQPYPQQIQPLQQPPYHQQGQYP     50

BSNT_03314___     38 QQHYGQQDY---YQPYAPIQP---MPMQPPVFSNPYPIPRPNQQQPSQFQ     81
                     ||.|..|:|   ..|:||..|   ||...|.|.||||:|||||||.|||.
RBAM_020400__     51 QQFYPNQEYGHMQPPFAPSPPQAGMPGGQPGFVNPYPVPRPNQQQSSQFS    100

BSNT_03314___     82 SIMSQFKKANGQFDFNKMMDTTGQVMSAMNQVGSLIKGFTSFFK    125
                     .|:|||||.|||||||||:|||||::||:||||||:|||||.||
RBAM_020400__    101 GILSQFKKTNGQFDFNKMIDTTGQMVSAVNQVGSLVKGFTSIFK    144


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