Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03257 and RBAM_020000

See DNA alignment / Visit BSNT_03257 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03257___yphP.1.9828.seq
#    -bsequence pep-align/RBAM_020000___yphP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03257___yphP-RBAM_020000___yphP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03257___yphP-RBAM_020000___yphP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: RBAM_020000___yphP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     134/144 (93.1%)
# Similarity:   142/144 (98.6%)
# Gaps:           0/144 ( 0.0%)
# Score: 698.0
# 
#
#=======================================

BSNT_03257___      1 MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVN     50
                     |||||||||||||||||||||||||:|||||||||:|||:||||||||||
RBAM_020000__      1 MSMAYEEYMRQLVVPMRRELTGAGFQELTTAEEVESFMEQAEGTTLVVVN     50

BSNT_03257___     51 SVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQ    100
                     ||||||||||||||||||||::|.||:||||||||||:||||||||||||
RBAM_020000__     51 SVCGCAAGLARPAATQAVLQHEKAPDHTVTVFAGQDKDATAKMREYFTGQ    100

BSNT_03257___    101 EPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMRNLTAAFDAHC    144
                     |||||||||||||||||||||||||||||||||:|||.||||||
RBAM_020000__    101 EPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTDAFDAHC    144


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