Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03252 and RBAM_019960

See DNA alignment / Visit BSNT_03252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03252___dfrA.1.9828.seq
#    -bsequence pep-align/RBAM_019960___dfrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03252___dfrA-RBAM_019960___dfrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03252___dfrA-RBAM_019960___dfrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03252___dfrA
# 2: RBAM_019960___dfrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     123/168 (73.2%)
# Similarity:   140/168 (83.3%)
# Gaps:           7/168 ( 4.2%)
# Score: 686.0
# 
#
#=======================================

BSNT_03252___      1 MISFIFAMDANRLIGKDNDLPWHLPNDLAYFKKVTSGHSIIMGRKTFESI     50
                     |||||||||.|||||||||||||||:|||||||||:||:|:|||||||||
RBAM_019960__      1 MISFIFAMDENRLIGKDNDLPWHLPDDLAYFKKVTTGHTIVMGRKTFESI     50

BSNT_03252___     51 GRPLPNRKNIVVTSAPSSEFPGCTVVGSLKDVLDICSGPEECFVIGGAQL    100
                     |||||||:||||||...|.||||....|.::||.:....|||||||||||
RBAM_019960__     51 GRPLPNRRNIVVTSRDESSFPGCITADSAEEVLKLIPADEECFVIGGAQL    100

BSNT_03252___    101 YTDLFPYADRLYMTKIHHEFEGDRHFPKFDESNWKLVSSEQGIKDEKNPY    150
                     |:.|||||||||||||||.|||||.||:|:|:.|:|.|.:||:|||||||
RBAM_019960__    101 YSALFPYADRLYMTKIHHVFEGDRFFPEFNEAEWELTSRKQGVKDEKNPY    150

BSNT_03252___    151 DYEFLMYEKKNSSKAGGF    168
                     |||:|:|||||       
RBAM_019960__    151 DYEYLVYEKKN-------    161


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