Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03106 and RBAM_018860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03106___yobS.1.9828.seq
# -bsequence pep-align/RBAM_018860___yobS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03106___yobS-RBAM_018860___yobS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03106___yobS-RBAM_018860___yobS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03106___yobS
# 2: RBAM_018860___yobS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 100/191 (52.4%)
# Similarity: 134/191 (70.2%)
# Gaps: 3/191 ( 1.6%)
# Score: 489.0
#
#
#=======================================
BSNT_03106___ 1 MSPRIGLTQKMIIDAAAEIADQEGVNGVSLAALSKKMNVRPPSLYNHING 50
||||:|::..||:.|||.|||::|:|.|:|||::|.:||:||||||.:||
RBAM_018860__ 1 MSPRVGMSLDMILRAAAGIADEKGLNEVTLAAVAKSLNVKPPSLYNFVNG 50
BSNT_03106___ 51 LQAIRAELAVRGLTKLFDQMADSVTERKGDSAMLSLAHAYVDFAIENPGY 100
||.|:.||||.|||.|:::||.|.....|::|:|:||.||::||..|||.
RBAM_018860__ 51 LQGIKTELAVSGLTMLYEKMAASAEGLTGETALLALADAYINFAEANPGL 100
BSNT_03106___ 101 YEAALLKVQDKRMEIVSDQIVCLVTKLLIENGYASEKTAIHATRGLRSLL 150
|:|...|::|.|:|.:|..:|.||.:.|..||||...|||||.|||||||
RBAM_018860__ 101 YDATFQKIKDGRIENLSSLLVELVVRQLTANGYAQSDTAIHAARGLRSLL 150
BSNT_03106___ 151 HGFTVLIAKEAFEREEDILESLSFSIRTFLSGLLINNKNIM 191
|||.||..:.|||..|.|.||..|::..||.||....:
RBAM_018860__ 151 HGFAVLRKQSAFELTESIKESRKFAVVAFLRGLQEREQ--- 188
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