Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03831 and RBAM_017040

See DNA alignment / Visit BSNT_03831 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_03831.1.9828.seq
#    -bsequence pep-align/RBAM_017040___nucB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03831-RBAM_017040___nucB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03831-RBAM_017040___nucB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03831
# 2: RBAM_017040___nucB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:      92/144 (63.9%)
# Similarity:   103/144 (71.5%)
# Gaps:          26/144 (18.1%)
# Score: 509.0
# 
#
#=======================================

BSNT_03831         1 --------------------------MVPQQIQGASSYDKVLYFPLSRYP     24
                                               ......:.||.||:|||||||:||
RBAM_017040__      1 MNAFMKWAASLLLVISLQFGFTGAGIHSDSAARAASRYDQVLYFPLSKYP     50

BSNT_03831        25 ETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPTKPGYDRDEWPMA     74
                     |||:||:|||:.||.:||||||.||:.||:|||||||||||:||||||||
RBAM_017040__     51 ETGNHIKDAISAGHSEICTIDRGGAENRRKESLKGIPTKPGFDRDEWPMA    100

BSNT_03831        75 VCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ    118
                     ||.|||||||:||||||||||||||||||||.|.||||||||||
RBAM_017040__    101 VCTEGGAGADIRYVTPSDNRGAGSWVGNQMSGYSDGTRVLFIVQ    144


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