Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02496 and RBAM_014920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence pep-align/BSNT_02496___ylbM.1.9828.seq
# -bsequence pep-align/RBAM_014920___ylbM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02496___ylbM-RBAM_014920___ylbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02496___ylbM-RBAM_014920___ylbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02496___ylbM
# 2: RBAM_014920___ylbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 415
# Identity: 286/415 (68.9%)
# Similarity: 333/415 (80.2%)
# Gaps: 0/415 ( 0.0%)
# Score: 1480.0
#
#
#=======================================
BSNT_02496___ 1 MKAVGLVVEYNPFHNGHLYHAQTAKRQTGCDTAVAVMSGHFLQRGEPAVV 50
|||||||||||||||||.|||:.||.:|....|.|||||.||||||||.|
RBAM_014920__ 1 MKAVGLVVEYNPFHNGHRYHAEQAKIKTDSSVAAAVMSGPFLQRGEPAAV 50
BSNT_02496___ 51 SKWARTKMALQSGVDLVIELPYLYAVQKADIFARGSVSILNELECKALFF 100
||||||||||::|||:||||||:||||||::|||||||:|:.|.|.:|||
RBAM_014920__ 51 SKWARTKMALENGVDIVIELPYIYAVQKAELFARGSVSLLHHLGCSSLFF 100
BSNT_02496___ 101 GSENGDIKPFLETAQLIGEHKHTFDDRIKEELKTGTSYPAAAASAFSSIL 150
|||||.|:||:|.::.....:......:|||||.|.||||||:.|||.|.
RBAM_014920__ 101 GSENGRIEPFIEASEAFSRKEDDCSLILKEELKKGLSYPAAASKAFSHIF 150
BSNT_02496___ 151 HTESALDLSKPNNILGYQYVTSVLTGGYPMKPYTTARISSDYHDADLPEG 200
.....|||||||||||:.||.::.|.|..|||||||||:|.||||:||..
RBAM_014920__ 151 KGRDMLDLSKPNNILGFHYVRAIHTSGSAMKPYTTARIASQYHDAELPGD 200
BSNT_02496___ 201 ENHIASATSIRKAMTGQNLEACLRFLPAASARELAAYRKSFGLWHTPESY 250
.:.||||||||||:..:...|...|||.||||||.|||.|:|:||:.|.|
RBAM_014920__ 201 NSRIASATSIRKALIEKGTAAARSFLPEASARELEAYRNSYGIWHSTEDY 250
BSNT_02496___ 251 FSYLKYSLSTVTAQELQQVYEVEEGLEHRILRSIRKSSSYQEFMELLKTK 300
|||:||||||::|:||.::|||||||||||||:||::.||:|.||.||||
RBAM_014920__ 251 FSYVKYSLSTLSAEELSRIYEVEEGLEHRILRTIRQARSYREMMERLKTK 300
BSNT_02496___ 301 RYTWTRLQRMNTHILTRTKKQDMQKLLDNDKAPYIRLLGMTKKGQAYLSE 350
||||||||||||||||||||:||.:||....||||||||||||||||||.
RBAM_014920__ 301 RYTWTRLQRMNTHILTRTKKEDMHRLLKPSSAPYIRLLGMTKKGQAYLSA 350
BSNT_02496___ 351 KKKALSVPLVSKLSSFSHPALDLDVKASRIYSLPIEEPLRTEFDLQEYGH 400
|||.|:.|||||||||||||||||:.|.|:|||||.||.||.|:.||:..
RBAM_014920__ 351 KKKELTAPLVSKLSSFSHPALDLDILAGRVYSLPINEPERTLFEKQEFSQ 400
BSNT_02496___ 401 APIRYDEDEQHFLNV 415
|||||||||:.|||.
RBAM_014920__ 401 APIRYDEDEKRFLNA 415
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