Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02401 and RBAM_014130

See DNA alignment / Visit BSNT_02401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_02401___fruK.1.9828.seq
#    -bsequence pep-align/RBAM_014130___fruK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02401___fruK-RBAM_014130___fruK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02401___fruK-RBAM_014130___fruK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02401___fruK
# 2: RBAM_014130___fruK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     271/303 (89.4%)
# Similarity:   284/303 (93.7%)
# Gaps:           0/303 ( 0.0%)
# Score: 1383.0
# 
#
#=======================================

BSNT_02401___      1 MIYTVTLNPSVDYIVHVEDFTVGGLNRSSYDTKYPGGKGINVSRLLKRHH     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_014130__      1 MIYTVTLNPSVDYIVHVEDFAVGGLNRSSYDTKYPGGKGINVSRLLKRHH     50

BSNT_02401___     51 VASKALGFVGGFTGEYIKTFLREENLETAFSEVKGDTRINVKLKTGDETE    100
                     |.||||||||||||.||.:||::|.||||||||..|||||||||||||||
RBAM_014130__     51 VPSKALGFVGGFTGNYITSFLQQEGLETAFSEVDEDTRINVKLKTGDETE    100

BSNT_02401___    101 INGQGPTISDEDFKAFLEQFQSLQEGDIVVLAGSIPSSLPHDTYEKIAEA    150
                     |||||||||||.|.||||||.:|:|||||||||||||||||:||||||||
RBAM_014130__    101 INGQGPTISDEVFNAFLEQFSALEEGDIVVLAGSIPSSLPHNTYEKIAEA    150

BSNT_02401___    151 CKQQNARVVLDISGEALLKATEMKPFLMKPNHHELGEMFGTAITSVEEAV    200
                     |::||||||:|||||||:|||||||||||||||||||||.|.|.|.|.||
RBAM_014130__    151 CRKQNARVVVDISGEALMKATEMKPFLMKPNHHELGEMFNTVIDSAEAAV    200

BSNT_02401___    201 PYGKKLVEQGAEHVIVSMAGDGALLFTNEAVYFANVPKGKLVNSVGAGDS    250
                     ||||||:||||||.|||||||||||||.|||:.|||||||||||||||||
RBAM_014130__    201 PYGKKLIEQGAEHAIVSMAGDGALLFTKEAVFLANVPKGKLVNSVGAGDS    250

BSNT_02401___    251 VVAGFLAGISKQLPLEEAFRLGVTSGSATAFSEELGTEEFVQQLLPEVKV    300
                     ||||||||||||||||:||||||.||||||||||||||||||||||||||
RBAM_014130__    251 VVAGFLAGISKQLPLEDAFRLGVASGSATAFSEELGTEEFVQQLLPEVKV    300

BSNT_02401___    301 TRL    303
                     |||
RBAM_014130__    301 TRL    303


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