Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02082 and RBAM_012350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02082.1.9828.seq
# -bsequence pep-align/RBAM_012350___yjlB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02082-RBAM_012350___yjlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02082-RBAM_012350___yjlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02082
# 2: RBAM_012350___yjlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity: 54/168 (32.1%)
# Similarity: 65/168 (38.7%)
# Gaps: 81/168 (48.2%)
# Score: 266.5
#
#
#=======================================
BSNT_02082 0 -------------------------------------------------- 0
RBAM_012350__ 1 MQKEDIQVLYFEDDGRIPNNPNLPLVIYKAVFNEETVQKAESVLSRHDWS 50
BSNT_02082 1 ----------------------------MIQFGGEKGAAIPFKSGDAVVI 22
:::||||:||....:.|||.||
RBAM_012350__ 51 NSWTGGVFPYHHFHSTTHEVLVAVKGNAVLRFGGEQGADAVLQMGDAAVI 100
BSNT_02082 23 PAGVGHKKLSASSDFTVIGAYPGGVQYDMKTGEPNEREEAVKQIKQAALP 72
|||.||||||.|||||||||||||.|||.|| |.|:|.. ::|.:..||
RBAM_012350__ 101 PAGTGHKKLSGSSDFTVIGAYPGGRQYDTKT-EKNDRTS--EEISRVPLP 147
BSNT_02082 73 ANDPITGKREPLLEIWVK 90
..||.|||..|||::|.|
RBAM_012350__ 148 ECDPFTGKTGPLLKLWEK 165
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