Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01449 and RBAM_008840

See DNA alignment / Visit BSNT_01449 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01449___ygxA.1.9828.seq
#    -bsequence pep-align/RBAM_008840___ygxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01449___ygxA-RBAM_008840___ygxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01449___ygxA-RBAM_008840___ygxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: RBAM_008840___ygxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     246/294 (83.7%)
# Similarity:   277/294 (94.2%)
# Gaps:           0/294 ( 0.0%)
# Score: 1325.0
# 
#
#=======================================

BSNT_01449___      1 MENLLRPIYQERASHPNTLAVIMIERRNKTSSLTDNFDAALLVIVKDADE     50
                     |:||||||||||||||:||||:|||||:|.||:||||||.:|||||.|||
RBAM_008840__      1 MDNLLRPIYQERASHPDTLAVLMIERRSKASSITDNFDAVMLVIVKQADE     50

BSNT_01449___     51 PVFIKHYEFDHQTASLHVVTDSQIQEWILLGTNRRIIDWIVNGRVLFDRN    100
                     |:|||||||:.:|||||:|||:.:|||||||||||:||||:||:||||||
RBAM_008840__     51 PLFIKHYEFEQKTASLHIVTDALLQEWILLGTNRRVIDWIINGKVLFDRN    100

BSNT_01449___    101 EYVVELIDRLNTFPFAERKLKIGLEYGKLIRRYVEGKAFFEANQFLDAYN    150
                     ||:.||.|||:||||||||||||:||||||||:|||||||||:.|||||.
RBAM_008840__    101 EYISELNDRLSTFPFAERKLKIGMEYGKLIRRFVEGKAFFEADHFLDAYY    150

BSNT_01449___    151 AVVHALHHLARIEVIDRGFHPETTVWSQVRQMEPQVYKLYSELIESHESL    200
                     |||||||||||||||||||:||||||:|||.:|||||||||||:||||||
RBAM_008840__    151 AVVHALHHLARIEVIDRGFYPETTVWNQVRHIEPQVYKLYSELVESHESL    200

BSNT_01449___    201 EKRLELLFLANDFLIHSKAEIGSAHLFEVMKEKDIWQFGELLQHHDLKHF    250
                     |||||||||||||||||||||||||||:|||||::|||||||||.:|.||
RBAM_008840__    201 EKRLELLFLANDFLIHSKAEIGSAHLFQVMKEKEMWQFGELLQHPELVHF    250

BSNT_01449___    251 TQDLGVMLDYLTEKGLINVCQIETKGQAVYHRGYSFKKGVDSDS    294
                     |||||||||||||||.:.|.|||||||.||||||||||.||::|
RBAM_008840__    251 TQDLGVMLDYLTEKGFVEVSQIETKGQEVYHRGYSFKKSVDAES    294


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