Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01327 and RBAM_008160

See DNA alignment / Visit BSNT_01327 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01327___yfkD.1.9828.seq
#    -bsequence pep-align/RBAM_008160___yfkD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01327___yfkD-RBAM_008160___yfkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01327___yfkD-RBAM_008160___yfkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01327___yfkD
# 2: RBAM_008160___yfkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     224/264 (84.8%)
# Similarity:   247/264 (93.6%)
# Gaps:           1/264 ( 0.4%)
# Score: 1190.0
# 
#
#=======================================

BSNT_01327___      1 MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQ     50
                      |:||||:|||:||.||||......|||.|||||||.|||||||||||||
RBAM_008160__      1 -MRKLFHATLILLLSFSFFATPSAAAKKPFKVPNSVVSISKENTYPNASQ     49

BSNT_01327___     51 DQPMLQPSKLAKELLDHSEVKIENPHLIKMLNESNISGTPLAVGYRATIF    100
                     ||||||||||||||||.||:.|||||||||||||::||:|||:|||||||
RBAM_008160__     50 DQPMLQPSKLAKELLDTSEINIENPHLIKMLNESSVSGSPLAIGYRATIF     99

BSNT_01327___    101 LGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKG    150
                     ||||||||:|||||||||||||||||||||||::||.:.|||||||::||
RBAM_008160__    100 LGKWALGYQSNETVANWEYKKINTNRADNRGGQQTAVISYAQEQQYKIKG    149

BSNT_01327___    151 GLTAKVPNAEDVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKK    200
                     ||||||||||||||||||||||||.|||||||||||||||||.||::|::
RBAM_008160__    150 GLTAKVPNAEDVKSMMMQKAMKKTKLPLAFETVIGAGTKRDQTYKISPQR    199

BSNT_01327___    201 IGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTSQGIGAWIPVQ    250
                     :|||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_008160__    200 LGYLHAYAPAVNEKGKVTYGEVYLVLKGSKRKLVVKNVTSQGIGAWIPVQ    249

BSNT_01327___    251 DHVTFGFQLSSLPR    264
                     ||||||||:::.||
RBAM_008160__    250 DHVTFGFQMTAQPR    263


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