Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01750 and RBAM_004570

See DNA alignment / Visit BSNT_01750 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01750___yhfO.1.9828.seq
#    -bsequence pep-align/RBAM_004570.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01750___yhfO-RBAM_004570.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01750___yhfO-RBAM_004570.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01750___yhfO
# 2: RBAM_004570
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:      40/151 (26.5%)
# Similarity:    66/151 (43.7%)
# Gaps:          13/151 ( 8.6%)
# Score: 140.0
# 
#
#=======================================

BSNT_01750___      1 MNIRQAKTSDAAALAPLFNQY-REFY-RQASDLQGAEAFLKARLENHESV     48
                     |.||.|:..|...|..|...| .:|| |....::.....::...|.:..:
RBAM_004570        1 MIIRSAEHYDVKQLTDLMYLYIVDFYKRPKPPIEKIHHLIEMLFEKNRGI     50

BSNT_01750___     49 ILTAEENGEFIGFTQLYPTFSSVSMKRIYILNDLFVAPYARTKGAGGRLL     98
                     ...||::|:.|||..||.:||:....:|.::|||||...||..||...|.
RBAM_004570       51 QFVAEQDGKLIGFATLYFSFSTTKADKITVMNDLFVIEKARGTGAAKELF    100

BSNT_01750___     99 SAAKDYAGENGAKCLTLQTEHHNRKARSLYEQNGYEEDTGFVHYSLNVPA    148
                     ...:.:..|||...::..|...|.:|::..::.....:.|          
RBAM_004570      101 KRCETFTKENGYAHMSWITASDNYRAQNSMKRWVAPLEIG----------    140

BSNT_01750___    149 K    149
                      
RBAM_004570      140 -    140


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