Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00222 and RBAM_001430

See DNA alignment / Visit BSNT_00222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00222___rplW.1.9828.seq
#    -bsequence pep-align/RBAM_001430___rplW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00222___rplW-RBAM_001430___rplW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00222___rplW-RBAM_001430___rplW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00222___rplW
# 2: RBAM_001430___rplW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      95/95 (100.0%)
# Similarity:    95/95 (100.0%)
# Gaps:           0/95 ( 0.0%)
# Score: 471.0
# 
#
#=======================================

BSNT_00222___      1 MKDPRDVLKRPVITERSADLMTEKKYTFEVDVRANKTEVKDAVESIFGVK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001430__      1 MKDPRDVLKRPVITERSADLMTEKKYTFEVDVRANKTEVKDAVESIFGVK     50

BSNT_00222___     51 VDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA     95
                     |||||||||||||||||||||||||||||||||||||||||||||
RBAM_001430__     51 VDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA     95


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