Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00205 and RBAM_001290

See DNA alignment / Visit BSNT_00205 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_00205___rplJ.1.9828.seq
#    -bsequence pep-align/RBAM_001290___rplJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00205___rplJ-RBAM_001290___rplJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00205___rplJ-RBAM_001290___rplJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00205___rplJ
# 2: RBAM_001290___rplJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     157/166 (94.6%)
# Similarity:   164/166 (98.8%)
# Gaps:           0/166 ( 0.0%)
# Score: 759.0
# 
#
#=======================================

BSNT_00205___      1 MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANV     50
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_001290__      1 MSSAIDTKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANV     50

BSNT_00205___     51 EFKVYKNTMTRRAVEQAELNGLNDFLTGPNAIAFSTEDVVAPAKVLNDFA    100
                     |||||||||||||||||||:||||.||||||||||||||:|||||||:||
RBAM_001290__     51 EFKVYKNTMTRRAVEQAELDGLNDVLTGPNAIAFSTEDVIAPAKVLNEFA    100

BSNT_00205___    101 KNHEALEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPVRNL    150
                     ||||||||||||||||||:|||||||||||||:|||||||||||||||||
RBAM_001290__    101 KNHEALEIKAGVIEGKVSSVEEVKALAELPSRDGLLSMLLSVLQAPVRNL    150

BSNT_00205___    151 AFAAKAVAEQKEEQGA    166
                     |.||||||:|||||||
RBAM_001290__    151 ALAAKAVADQKEEQGA    166


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