Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00066 and RBAM_000420

See DNA alignment / Visit BSNT_00066 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_00066___yabA.1.9828.seq
#    -bsequence pep-align/RBAM_000420___yabA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00066___yabA-RBAM_000420___yabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00066___yabA-RBAM_000420___yabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: RBAM_000420___yabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:     113/119 (95.0%)
# Similarity:   117/119 (98.3%)
# Gaps:           0/119 ( 0.0%)
# Score: 604.0
# 
#
#=======================================

BSNT_00066___      1 MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000420__      1 MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRK     50

BSNT_00066___     51 RLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVH    100
                     ||||||:||||||||:||:||||.||:|||||||||||||||||||||||
RBAM_000420__     51 RLDDTTEQIEKFKADQKETKTQKAEQSDIGEGYDNLARLYQEGFHICNVH    100

BSNT_00066___    101 YGSVRKEDCLFCLSFLNKK    119
                     ||||||.||||||||||||
RBAM_000420__    101 YGSVRKGDCLFCLSFLNKK    119


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