Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05533 and BSU36250
See
DNA alignment /
Visit
BSNT_05533 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_05533___ywqD.1.22522.seq
# -bsequence pep-align/BSU36250___ptkA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05533___ywqD-BSU36250___ptkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05533___ywqD-BSU36250___ptkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05533___ywqD
# 2: BSU36250___ptkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 223/238 (93.7%)
# Similarity: 224/238 (94.1%)
# Gaps: 11/238 ( 4.6%)
# Score: 1117.0
#
#
#=======================================
BSNT_05533___ 1 ----------MRRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMI 40
|:||||||||||||||||||||||||||||||||||||||
BSU36250___pt 1 MALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMI 50
BSNT_05533___ 41 TSACPGEGKSTTAANLAVVFAQQGKKVLLIDADLRKPTVHTAFFLENTVG 90
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36250___pt 51 TSACPGEGKSTTAANLAVVFAQQGKKVLLIDADLRKPTVHTAFFLENTVG 100
BSNT_05533___ 91 LTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAELLSSKWMKELAYE 140
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36250___pt 101 LTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAELLSSKWMKELAYE 150
BSNT_05533___ 141 ACAAYDMVIFDTPPILAVADAQILGNVADGSVLVISSGKTEKEQAAKAKE 190
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36250___pt 151 ACAAYDMVIFDTPPILAVADAQILGNVADGSVLVISSGKTEKEQAAKAKE 200
BSNT_05533___ 191 ALETCKSKLLGAIMNGKKLSKHSEYGYYGNKDNFMQNK 228
||.||||||||||||||||||||||||||.||||||.
BSU36250___pt 201 ALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK- 237
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.