Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05397 and BSU35520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence pep-align/BSNT_05397___yvhJ.1.22522.seq
# -bsequence pep-align/BSU35520___yvhJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05397___yvhJ-BSU35520___yvhJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05397___yvhJ-BSU35520___yvhJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05397___yvhJ
# 2: BSU35520___yvhJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 214/392 (54.6%)
# Similarity: 268/392 (68.4%)
# Gaps: 63/392 (16.1%)
# Score: 1099.0
#
#
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BSNT_05397___ 1 MPERVKVRV-KKKKNKRKIILKRILLLFFLFSIVFAGIIGYKVYKTLQAA 49
|.|||:||| ||||:||:.|||||:|||.|..:|..|:.|||:|||:.||
BSU35520___yv 1 MAERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAA 50
BSNT_05397___ 50 DSSYKELDRGEKSKLRKEVVDLKKKQPFSVLLLGVEDYATGGKGGRTDSI 99
|.||..|.||.||.||.||||:||| |||:|.:|:|||||.|:.||:||:
BSU35520___yv 51 DESYDALSRGNKSNLRNEVVDMKKK-PFSILFMGIEDYATKGQKGRSDSL 99
BSNT_05397___ 100 IVATINPKQKTMKLLSIPRDTRVEISGDTSGTKTRINSAYGKGGAQTTVE 149
||.|::||.||||:|||||||||:::|||:|:||:||:||.|||...|||
BSU35520___yv 100 IVVTLDPKNKTMKMLSIPRDTRVQLAGDTTGSKTKINAAYSKGGKDETVE 149
BSNT_05397___ 150 TVEKLLNIPIDYYATVDFKGFKKTIDEVGGVDVEVPFDFNEKSDTSKSKK 199
|||..|.||||.|.||||.|||..|:||||:||:|||||:||||..:||:
BSU35520___yv 150 TVENFLQIPIDKYVTVDFDGFKDVINEVGGIDVDVPFDFDEKSDVDESKR 199
BSNT_05397___ 200 FYFQKGNMHLNGEEALAYARMRKQDPRGDFGRNDRQKQILMAMLDQVSKP 249
.||:||.||||||||||||||||||.||||||||||||||.|::|::|..
BSU35520___yv 200 IYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILNALIDRMSSA 249
BSNT_05397___ 250 SNLAKIDTLADQVSDNITTNLRITQVLALQQIFSGFKGNDVETLTLKGSD 299
||:||||.:|::.|:|:.||:|||:.||||||:|||....::||::.|||
BSU35520___yv 250 SNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSD 299
BSNT_05397___ 300 LYIG--NKYFFQPDDEELTKVQEELYNFL--YPDK--------------- 330
||:| |.|:|:||...|.||::.|...| .||.
BSU35520___yv 300 LYLGPNNTYYFEPDATNLEKVRKTLQEHLDYTPDTSTGTSGTEDGTDSSS 349
BSNT_05397___ 330 ------------------------------------------ 330
BSU35520___yv 350 SSGSTGSTGTTTDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY 391
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