Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04436 and BSU30450

See DNA alignment / Visit BSNT_04436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_04436___ytrB.1.22522.seq
#    -bsequence pep-align/BSU30450___ytrB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04436___ytrB-BSU30450___ytrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04436___ytrB-BSU30450___ytrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04436___ytrB
# 2: BSU30450___ytrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     291/292 (99.7%)
# Similarity:   291/292 (99.7%)
# Gaps:           0/292 ( 0.0%)
# Score: 1478.0
# 
#
#=======================================

BSNT_04436___      1 MIELRQLSKAIDGNQVLKDVSLTIEKGEIFGLLGRNGSGKTTMLRLIQQI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt      1 MIELRQLSKAIDGNQVLKDVSLTIEKGEIFGLLGRNGSGKTTMLRLIQQI     50

BSNT_04436___     51 IFADSGTILFDGVEIKKHPKVKQNIIYMPVQNPFYDKYTYKQLVDILRRI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt     51 IFADSGTILFDGVEIKKHPKVKQNIIYMPVQNPFYDKYTYKQLVDILRRI    100

BSNT_04436___    101 YPKFDVTYANELMNRYEIPETKKYRELSTGLKKQLSLVLSFAARPALILL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt    101 YPKFDVTYANELMNRYEIPETKKYRELSTGLKKQLSLVLSFAARPALILL    150

BSNT_04436___    151 DEPTDGIDAVTRHDVLQLMVDEVAERDTSILITSHRLEDIERMCNRIGFL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt    151 DEPTDGIDAVTRHDVLQLMVDEVAERDTSILITSHRLEDIERMCNRIGFL    200

BSNT_04436___    201 EDNRLTNVMDLDELKEEYIKIQMAFDTDVNLAIREQNIPMLDQAGVFYTV    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt    201 EDNSLTNVMDLDELKEEYIKIQMAFDTDVNLAIREQNIPMLDQAGVFYTV    250

BSNT_04436___    251 LIPKSDEEKKSFLRELKPKVWNELPVNLEEVFIAKFGGKRRW    292
                     ||||||||||||||||||||||||||||||||||||||||||
BSU30450___yt    251 LIPKSDEEKKSFLRELKPKVWNELPVNLEEVFIAKFGGKRRW    292


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.