Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04238 and BSU29020

See DNA alignment / Visit BSNT_04238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_04238___gapB.1.22522.seq
#    -bsequence pep-align/BSU29020___gapB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04238___gapB-BSU29020___gapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04238___gapB-BSU29020___gapB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04238___gapB
# 2: BSU29020___gapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     340/340 (100.0%)
# Similarity:   340/340 (100.0%)
# Gaps:           0/340 ( 0.0%)
# Score: 1745.0
# 
#
#=======================================

BSNT_04238___      1 MKVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASYSAETLAHLIKYDTI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga      1 MKVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASYSAETLAHLIKYDTI     50

BSNT_04238___     51 HGRYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga     51 HGRYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKF    100

BSNT_04238___    101 NAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    101 NAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNA    150

BSNT_04238___    151 SCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    151 SCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA    200

BSNT_04238___    201 CGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    201 CGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKT    250

BSNT_04238___    251 DVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTM    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    251 DVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTM    300

BSNT_04238___    301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV    340
                     ||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV    340


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