Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04234 and BSU28990

See DNA alignment / Visit BSNT_04234 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_04234___dnaB.1.22522.seq
#    -bsequence pep-align/BSU28990___dnaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04234___dnaB-BSU28990___dnaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04234___dnaB-BSU28990___dnaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04234___dnaB
# 2: BSU28990___dnaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity:     469/472 (99.4%)
# Similarity:   472/472 (100.0%)
# Gaps:           0/472 ( 0.0%)
# Score: 2419.0
# 
#
#=======================================

BSNT_04234___      1 MADYWKDVLPVDPYVVKSRSMLQDIDRQIITQLYQPLIGPVAFSLYMTLW     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn      1 MADYWKDVLPVDPYVVKSRSMLQDIDRQIITQLYQPLIGPVAFSLYMTLW     50

BSNT_04234___     51 GELEQNRLWGGESTHRQLMGMTQSNLKTIHQEQGKLEGIGLLKVYMKESE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn     51 GELEQNRLWGGESTHRQLMGMTQSNLKTIHQEQGKLEGIGLLKVYMKESE    100

BSNT_04234___    101 RQERLFIYELLPPLRPNEFFEDGMLNVFLYNRVGKTKYQQLKQFFTHPAI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn    101 RQERLFIYELLPPLRPNEFFEDGMLNVFLYNRVGKTKYQQLKQFFTHPAI    150

BSNT_04234___    151 SEDAKDITRPFNHAFESLQPSEWKLTSDMEETVRLAEGTEYTSVGQSPSY    200
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BSU28990___dn    151 SEDAKDITRPFNHAFESLQPSEWKLTSDMEETVRLAEGSEYTSVGQSPSY    200

BSNT_04234___    201 TITEDVFDFDLFLAGLSETMIPRKAMTQQVRDTIKKLSYLYGIDPLQMQN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn    201 TITEDVFDFDLFLAGLSETMIPRKAMTQQVRDTIKKLSYLYGIDPLQMQN    250

BSNT_04234___    251 VVMSAIDERDVITTEALRKAASDWYQIERNGQLPDLVEKTQPVHLREGEK    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BSU28990___dn    251 VVMSAIDERDVITTEALRKAASDWYQIERNGQLPDLVEKTQPVHLREGEQ    300

BSNT_04234___    301 PAEDDSLDGKLIALLEAISPKKLLQDIADGTEPSKADLKIIEEIMFEQKL    350
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn    301 PAEEDSLDGKLIALLEAISPKKLLQDIADGTEPSKADLKIIEEIMFEQKL    350

BSNT_04234___    351 EPGVTNVLIYYVMLKTDMKLSKNYIQKIASHWARKKVKTVREAMKLAIEE    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn    351 EPGVTNVLIYYVMLKTDMKLSKNYIQKIASHWARKKVKTVREAMKLAIEE    400

BSNT_04234___    401 NRQYLEWAEGKTKSSKRNQKVIREEKLPDWMTEKETASDSESGQQKLHPQ    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28990___dn    401 NRQYLEWAEGKTKSSKRNQKVIREEKLPDWMTEKETASDSESGQQKLHPQ    450

BSNT_04234___    451 DLEEQKKKMMEEMQKLKKYSAY    472
                     ||||||||||||||||||||||
BSU28990___dn    451 DLEEQKKKMMEEMQKLKKYSAY    472


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