Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00919 and BSU25780
See
DNA alignment /
Visit
BSNT_00919 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:21
# Commandline: needle
# -asequence pep-align/BSNT_00919.1.22522.seq
# -bsequence pep-align/BSU25780___arsC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00919-BSU25780___arsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00919-BSU25780___arsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00919
# 2: BSU25780___arsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity: 37/139 (26.6%)
# Similarity: 48/139 (34.5%)
# Gaps: 83/139 (59.7%)
# Score: 144.5
#
#
#=======================================
BSNT_00919 1 -------------------------------------------MTSSAVK 7
:..:|||
BSU25780___ar 1 MENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVK 50
BSNT_00919 8 AMKEAGIDISNQTSDKFE---------------------------IRQKH 30
||||.||||||||||..: ::::|
BSU25780___ar 51 AMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREH 100
BSNT_00919 31 -----------TEQKK--CFQRVRAEIGDRLKQFAVTGK 56
||::| .|||||.|||:|||:||.|||
BSU25780___ar 101 WGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK 139
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.