Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02771 and BSU17060

See DNA alignment / Visit BSNT_02771 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence pep-align/BSNT_02771___ymzD.1.22522.seq
#    -bsequence pep-align/BSU17060___ymzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02771___ymzD-BSU17060___ymzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02771___ymzD-BSU17060___ymzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02771___ymzD
# 2: BSU17060___ymzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     145/154 (94.2%)
# Similarity:   149/154 (96.8%)
# Gaps:           3/154 ( 1.9%)
# Score: 721.0
# 
#
#=======================================

BSNT_02771___      1 MSYLNQKEQNEHSKDFNLRSKLIGIVSITFIAAIALAVIFGGFFFGMKGL     50
                        :||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym      1 ---MNQKEQNEHSKDFNLRSKLIGIVSITFIAAIALAVIFGGFFFGMKGL     47

BSNT_02771___     51 FSILGITYASNQTLALFILACFAVGLIIDPLTKILSIILAKSLSLKKTAL    100
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
BSU17060___ym     48 FSILGITYASNQTLALFILACFAVGLIIDPLTKIISIILAKSLSLKKTAL     97

BSNT_02771___    101 FAFILYFISNLITICFADYFMESIYIPDILLVVISAFMAFIELTFDNQPN    150
                     |||||||||||||||||||||:||||||:||||||||||.|||.||||||
BSU17060___ym     98 FAFILYFISNLITICFADYFMQSIYIPDVLLVVISAFMAIIELAFDNQPN    147

BSNT_02771___    151 REAA    154
                     ||||
BSU17060___ym    148 REAA    151


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.