Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02406 and BSU14430

See DNA alignment / Visit BSNT_02406 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:10
# Commandline: needle
#    -asequence pep-align/BSNT_02406.1.22522.seq
#    -bsequence pep-align/BSU14430___ykpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02406-BSU14430___ykpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02406-BSU14430___ykpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02406
# 2: BSU14430___ykpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 552
# Identity:     432/552 (78.3%)
# Similarity:   437/552 (79.2%)
# Gaps:         104/552 (18.8%)
# Score: 2184.5
# 
#
#=======================================

BSNT_02406         1 MIAVNNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk      1 MIAVNNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGE     50

BSNT_02406        51 IEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk     51 IEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKD    100

BSNT_02406       101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHT    150

BSNT_02406       151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN    200

BSNT_02406       201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKL    250

BSNT_02406       251 SQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    251 SQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS    300

BSNT_02406       301 SRRYPYVNFTPEREIGNDVLRVEGLTKTIDGVKVLDNVSFIMNREDKIAF    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    301 SRRYPYVNFTPEREIGNDVLRVEGLTKTIDGVKVLDNVSFIMNREDKIAF    350

BSNT_02406       351 TGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDL    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14430___yk    351 TGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDL    400

BSNT_02406       401 NLVDWLRQYSPHDQSESFLRGFLDACCSLEKKSTKKQMYFPGE---KRSA    447
                     |||||||||||||||||||||||.            :|.|.||   |::.
BSU14430___yk    401 NLVDWLRQYSPHDQSESFLRGFLG------------RMLFSGEEVHKKAN    438

BSNT_02406       448 VCC---RKRCFLAPIF----------------------------------    460
                     |..   :.||.|:...                                  
BSU14430___yk    439 VLSGGEKVRCMLSKAMLSGANILILDEPTNHLDLESITALNNGLISFKGA    488

BSNT_02406       460 --------------------------------------------------    460
                                                                       
BSU14430___yk    489 MLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLENADVQKKLTELY    538

BSNT_02406       460 --    460
                       
BSU14430___yk    539 AE    540


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