Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01516 and BSU08930

See DNA alignment / Visit BSNT_01516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:27
# Commandline: needle
#    -asequence pep-align/BSNT_01516___cspR.1.22522.seq
#    -bsequence pep-align/BSU08930___cspR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01516___cspR-BSU08930___cspR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01516___cspR-BSU08930___cspR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01516___cspR
# 2: BSU08930___cspR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     154/160 (96.2%)
# Similarity:   157/160 (98.1%)
# Gaps:           3/160 ( 1.9%)
# Score: 819.0
# 
#
#=======================================

BSNT_01516___      1 ---MALHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKR     47
                        :||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs      1 MNIVALHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKR     50

BSNT_01516___     48 AGLDYWEFVNVVYHDSLEELFEAYEKGQFFFITKFGQQPHTSFDYTDLDE     97
                     ||||||||||||||||||||||||:||:||||||||||||||||||||||
BSU08930___cs     51 AGLDYWEFVNVVYHDSLEELFEAYKKGKFFFITKFGQQPHTSFDYTDLDE    100

BSNT_01516___     98 DYFFVFGRETSGLPKDLIQNNMDRCLRLPMTEHVRSLNLSNTAAILVYEA    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs    101 DYFFVFGRETSGLPKDLIQNNMDRCLRLPMTEHVRSLNLSNTAAILVYEA    150

BSNT_01516___    148 LRQQNYRDLK    157
                     ||||||||||
BSU08930___cs    151 LRQQNYRDLK    160


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