Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00590 and BSU03350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:49
# Commandline: needle
# -asequence pep-align/BSNT_00590.1.22522.seq
# -bsequence pep-align/BSU03350___yciB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00590-BSU03350___yciB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00590-BSU03350___yciB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00590
# 2: BSU03350___yciB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 121/194 (62.4%)
# Similarity: 123/194 (63.4%)
# Gaps: 71/194 (36.6%)
# Score: 661.0
#
#
#=======================================
BSNT_00590 0 -------------------------------------------------- 0
BSU03350___yc 1 MKLSLFIIAVLMPVILLSACSDHAEEHASINTKKTVENITDVRKTAKTSI 50
BSNT_00590 1 ---------------------MNVKEQKAYIKEGSNTIYTMMISSGLDQT 29
:||||||||||||||||||||||||||||
BSU03350___yc 51 DWTKPSGGEYPDIKQKHVWIDVNVKEQKAYIKEGSNTIYTMMISSGLDQT 100
BSNT_00590 30 KDDATPKGTFYVEPERGEWFFSEGYQEGAEYWVSWKNHGEFLFHSVPMTK 79
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BSU03350___yc 101 KDDATPKGTFYVEPERGEWFFSEGYQEGAEYWVSWKNHGEFLFHSVPMTK 150
BSNT_00590 80 DQKVIKTEAEKLGTKASHGCIRLTIPDAKWIYENIPEHTKVVIS 123
||||||||||||||||||||||||||||||:|||||||||||||
BSU03350___yc 151 DQKVIKTEAEKLGTKASHGCIRLTIPDAKWVYENIPEHTKVVIS 194
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