Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03929 and BPUM_3710

See DNA alignment / Visit BSNT_03929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_03929___sigV.1.24716.seq
#    -bsequence pep-align/BPUM_3710___sigV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03929___sigV-BPUM_3710___sigV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03929___sigV-BPUM_3710___sigV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03929___sigV
# 2: BPUM_3710___sigV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:      87/166 (52.4%)
# Similarity:   127/166 (76.5%)
# Gaps:           2/166 ( 1.2%)
# Score: 481.0
# 
#
#=======================================

BSNT_03929___      1 MKKKQTTKALLVTCITDHKQDFYRLAFSYVKNQDDALDIVQESIKKALSS     50
                      .||:..:......:.:||..||||::|||||.:||:|:|||:|.|||.|
BPUM_3710___s      1 -MKKRKIEDQFADYVMEHKHSFYRLSYSYVKNPEDAMDVVQEAIHKALKS     49

BSNT_03929___     51 VETVRNPETIKSWFYKILVRTAIDFLRKQKKIRVMDDETIEFLSKGKEDH    100
                     |..:.:...:.||||||:|..|:|||||:|:::|.||:|:||||||:.|.
BPUM_3710___s     50 VHRLEDATKMHSWFYKIVVNAALDFLRKKKRVQVTDDDTLEFLSKGESDI     99

BSNT_03929___    101 YKDTDLYEALDELPYRYKTIIILRFFEDLKLEEIAEITGENTNTVKTRLY    150
                     |:|.|:..|:::||..|:.|||||||||||||:||.|..||.||:|||||
BPUM_3710___s    100 YEDQDVRRAIEDLPDMYRVIIILRFFEDLKLEDIAHILEENENTIKTRLY    149

BSNT_03929___    151 RALKLMRIQLTKEDLS    166
                     :||:|::::|::|:: 
BPUM_3710___s    150 KALRLLKVELSQEEI-    164


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