Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05919 and BPUM_3512

See DNA alignment / Visit BSNT_05919 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence pep-align/BSNT_05919___yxlD.1.24716.seq
#    -bsequence pep-align/BPUM_3512___yxlD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05919___yxlD-BPUM_3512___yxlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05919___yxlD-BPUM_3512___yxlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05919___yxlD
# 2: BPUM_3512___yxlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 70
# Identity:      34/70 (48.6%)
# Similarity:    47/70 (67.1%)
# Gaps:           2/70 ( 2.9%)
# Score: 174.0
# 
#
#=======================================

BSNT_05919___      1 MTQTEIVITVAAYLIVLAQGIFLFIDAKKRNRMAWIWGIVGLITAPMPLI     50
                     |::||::|.:.|..::.|||:.||:|||||.|..|.|||||||..|...|
BPUM_3512___y      1 MSETEMIILLCALPLLFAQGLLLFMDAKKRGRYKWFWGIVGLINFPSSSI     50

BSNT_05919___     51 CYYFFVIRPDRKK-RGIKQ-     68
                     .|:..|:.||||| ..|:: 
BPUM_3512___y     51 LYWLCVVYPDRKKEEKIRKD     70


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