Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05790 and BPUM_3428
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05790___spsJ.1.24716.seq
# -bsequence pep-align/BPUM_3428___spsJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05790___spsJ-BPUM_3428___spsJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05790___spsJ-BPUM_3428___spsJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05790___spsJ
# 2: BPUM_3428___spsJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 227/321 (70.7%)
# Similarity: 262/321 (81.6%)
# Gaps: 6/321 ( 1.9%)
# Score: 1203.0
#
#
#=======================================
BSNT_05790___ 1 MAKSYLITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMEKLKQ 50
|.||||||||||||||.|.||:|:|||.|:||.||||||||||||::|.:
BPUM_3428___s 1 MTKSYLITGGAGFIGLNFVKLLLQETDVRLTVFDKLTYASHPEEMDELLK 50
BSNT_05790___ 51 NSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAESHVDRSISQAEPFITT 100
.|.|||::|||::|.::|:||||.||.:|||||||||||||..|||||.|
BPUM_3428___s 51 LSHFRFIQGDITLQHELDQAFDEVYDAIIHFAAESHVDRSIESAEPFIQT 100
BSNT_05790___ 101 NVMGTYRLAEAVLKGKAKKLIHISTDEVYGDLKADDPAFTETTPLSPNNP 150
||:||||:.|||||||||||||||||||||||:.||.||||.||||||||
BPUM_3428___s 101 NVLGTYRMLEAVLKGKAKKLIHISTDEVYGDLELDDSAFTEQTPLSPNNP 150
BSNT_05790___ 151 YSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEKMIPTIIRHAK 200
||||||||||||.||:.||:|||:|||||||||||||.||:||||||.|.
BPUM_3428___s 151 YSASKASSDLLVKSYIHTHQLPAMITRCSNNYGPYQHEEKLIPTIIRKAI 200
BSNT_05790___ 201 QGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTN 250
.|..:|:||||.||||||:.|||.:|:|.:||.||.|:|||||||||:||
BPUM_3428___s 201 NGEKIPIYGDGQQIRDWLYVEDHAKAVKQVLENGTAGQVYNIGGGNEKTN 250
BSNT_05790___ 251 KELASVILKHLG-CEELFAHVEDRKGHDRRYAINASKLKNELGWRQEVTF 299
.:|...||..|| ..:..|.|||||||||||||:|||||..|||.|..:|
BPUM_3428___s 251 LDLTKTILTQLGISHDRIAFVEDRKGHDRRYAIDASKLKRGLGWTQLTSF 300
BSNT_05790___ 300 EEGIARTIQWY-TDNDR---- 315
|.||.:||.|| |..|:
BPUM_3428___s 301 EAGIEKTINWYRTKYDQSEEG 321
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