Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05581 and BPUM_3303

See DNA alignment / Visit BSNT_05581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence pep-align/BSNT_05581___ywnH.1.24716.seq
#    -bsequence pep-align/BPUM_3303___ywnH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05581___ywnH-BPUM_3303___ywnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05581___ywnH-BPUM_3303___ywnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05581___ywnH
# 2: BPUM_3303___ywnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     107/165 (64.8%)
# Similarity:   131/165 (79.4%)
# Gaps:           1/165 ( 0.6%)
# Score: 577.0
# 
#
#=======================================

BSNT_05581___      1 MNMTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFLGHTE     50
                     |....|:|...||:|:|.|||||||||.||||||||:.|||.:|||.|:|
BPUM_3303___y      1 MKTFNRIATEDDLKAIVDIYNSTIASREVTADTEPVSVEDRRQWFLNHSE     50

BSNT_05581___     51 ARPLYVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACRGKGVGS    100
                     .|||||..||:|::..|:||||||||||||.|.|:|||:::..||||:||
BPUM_3303___y     51 KRPLYVKTDEDGHIYGWLSFETFYGRPAYNGTVEMSIYLNQDYRGKGLGS    100

BSNT_05581___    101 YLLQEALRIAPDLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEM    150
                     ..||||:.:||.||||:|:|||||||:.|::||:||||..||..|.||||
BPUM_3303___y    101 LFLQEAIELAPSLGIRTLLAFIFGHNEASIRLFKKHGFETWGHLPRIAEM    150

BSNT_05581___    151 DGKRYDLKILGRELS    165
                     ||.||||.|||:|| 
BPUM_3303___y    151 DGSRYDLDILGKEL-    164


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