Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05568 and BPUM_3295
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_05568___ywoD.1.24716.seq
# -bsequence pep-align/BPUM_3295___ywoD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05568___ywoD-BPUM_3295___ywoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05568___ywoD-BPUM_3295___ywoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05568___ywoD
# 2: BPUM_3295___ywoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 296/473 (62.6%)
# Similarity: 359/473 (75.9%)
# Gaps: 32/473 ( 6.8%)
# Score: 1462.0
#
#
#=======================================
BSNT_05568___ 1 MLSKK---SRAVFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFTTVS 47
.|| :|.|||||:|.|||||||||||||||||.|||||.|||||||
BPUM_3295___y 1 --MKKWRDNRKVFLTAIAFGTMLNPLNSSMISLALHQIQHEFGLSFTTVS 48
BSNT_05568___ 48 WLISSFYLASAVAQPVTGKLGD-LIGRKRLFLFGLILVAVSAIGAPFAPT 96
||||||||||||.|||:|::|| ::.|:.||||||.|||||||.||||||
BPUM_3295___y 49 WLISSFYLASAVTQPVSGRIGDHVMSRRTLFLFGLGLVAVSAICAPFAPT 98
BSNT_05568___ 97 FMTLLVMRLFQSVGSSAIYPSGVGLIRNHIHERQASALAVLSIFASAMTA 146
|..|:|:||.|::||||||||||||||:||.|:|||||||||||||||||
BPUM_3295___y 99 FAVLIVIRLLQAIGSSAIYPSGVGLIRDHIQEKQASALAVLSIFASAMTA 148
BSNT_05568___ 147 LGPTVGGFLIVWGGWPAIFIVNLPFIILSFLLGLYMFPKDQKK-GAGIKT 195
||||:||||:..|||||||:||||||::||.|||.:|||:||| ...|..
BPUM_3295___y 149 LGPTLGGFLMTIGGWPAIFLVNLPFILISFFLGLSLFPKEQKKRKLRIGE 198
BSNT_05568___ 196 IIQQLDILGIVLFAGGIIFLLSFLLSFSTSPHAVEGVLGLLLLCAFVWRE 245
.:::||:.|::||...|:.|||||||.......|:|||.||...||:|.|
BPUM_3295___y 199 TVRKLDLPGMLLFTVCIVLLLSFLLSLGHGIQYVQGVLCLLSAGAFIWWE 248
BSNT_05568___ 246 LKTDKPFIDVRLFKTQRNLSAVYVQFILLNVFFYCLFFGLPSYFQDEMHL 295
.:.|:|||.:|:|:.::.||.||||||:||:||||||||||||||||:..
BPUM_3295___y 249 YQVDEPFIQIRMFRQEQRLSLVYVQFIILNIFFYCLFFGLPSYFQDELGW 298
BSNT_05568___ 296 SVQTSGLFMLFMSGMSIVVSPLTGKWIDRSGVVKPIFAGALLMTAGAVLL 345
.|:.:|||||.|||:||::|||||||:||.....|:.|.|:||.|||..:
BPUM_3295___y 299 RVEMTGLFMLCMSGVSIIISPLTGKWVDRGDERHPVLASAVLMLAGASAM 348
BSNT_05568___ 346 TIFFINVETIGKGLILSLLGIGYGLGNVALQAAMLKTSPSNMVGTTSGLF 395
|.|||.....||||:|:|||:.||:|||||||||||.||.:|:||:||||
BPUM_3295___y 349 TFFFIPAPLWGKGLVLALLGLSYGIGNVALQAAMLKASPQHMIGTSSGLF 398
BSNT_05568___ 396 QTCRYLGSILSSVILGILFGKEITAAHFDMMG---IIMIIAG-------- 434
||||||||||||.:||:|||.||...||:.:| ||:.:.|
BPUM_3295___y 399 QTCRYLGSILSSAVLGMLFGDEIAGPHFEQLGWTLIIISLTGIGVSLYFS 448
BSNT_05568___ 435 -----GASLLMAVRFAALMKTAS 452
|.|:..|||
BPUM_3295___y 449 NKVKEGRSIKKAVR--------- 462
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