Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05554 and BPUM_3286

See DNA alignment / Visit BSNT_05554 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_05554___ywpB.1.24716.seq
#    -bsequence pep-align/BPUM_3286___fabZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05554___ywpB-BPUM_3286___fabZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05554___ywpB-BPUM_3286___fabZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05554___ywpB
# 2: BPUM_3286___fabZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     106/144 (73.6%)
# Similarity:   117/144 (81.2%)
# Gaps:           3/144 ( 2.1%)
# Score: 553.0
# 
#
#=======================================

BSNT_05554___      1 MLDTQQIKEIIPHRYPFLLVDRITEVEEGKRAKGYKNVTANEEFFNGHFP     50
                     |||.|||::||||||||||||||.|||..|||.|.||||.||||||||||
BPUM_3286___f      1 MLDAQQIQDIIPHRYPFLLVDRILEVEGEKRAVGIKNVTVNEEFFNGHFP     50

BSNT_05554___     51 QYPVMPGVLIVEALAQVGAVAMLIKEENRGRLAFFAGIDNCRFKKQVKPG    100
                     .||||||||||||||||..|.||.||||:|::..|||||.||||:|||||
BPUM_3286___f     51 GYPVMPGVLIVEALAQVFGVIMLGKEENKGKIGLFAGIDGCRFKRQVKPG    100

BSNT_05554___    101 DQLHLEVEIIRARGTIGRGKGVATVDGEVVCEVELTFALGE---    141
                     |||.||||:.|.||.:.:||.||||||||.||.||||::|.   
BPUM_3286___f    101 DQLRLEVEVTRLRGPVAKGKAVATVDGEVACEAELTFSIGPKVS    144


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