Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05389 and BPUM_3194

See DNA alignment / Visit BSNT_05389 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05389___comFC.1.24716.seq
#    -bsequence pep-align/BPUM_3194___comFC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05389___comFC-BPUM_3194___comFC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05389___comFC-BPUM_3194___comFC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05389___comFC
# 2: BPUM_3194___comFC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     116/241 (48.1%)
# Similarity:   156/241 (64.7%)
# Gaps:          14/241 ( 5.8%)
# Score: 576.0
# 
#
#=======================================

BSNT_05389___      1 MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKI     50
                                :|||:|:.......||::|.||. |:::|.:|:..|:||
BPUM_3194___c      1 -----------MICLICEGHVVTPFTWKSLLLLN-DDRLCIACKHHLEKI     38

BSNT_05389___     51 TGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVYTYNDMMKET    100
                     ...|||.|||.||...:|:||..|:.|...:.:|.:|||||.|||:||:.
BPUM_3194___c     39 KRPICPACGRAQSNDQLCQDCSWWKERPDSTTVLVKNRSVYAYNDLMKDV     88

BSNT_05389___    101 LSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGF    150
                     |||||||||..:...||.|..:.|.:.:..|..||:||||||||::||||
BPUM_3194___c     89 LSRFKFRGDTALAELFKQDAQAVFKRSFSMKEPVLIPIPLSKERQKERGF    138

BSNT_05389___    151 NQAQLLAECLDRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSA-E    199
                     ||:.:||..:.:|...||::::..|||||||.|||..:.:|..|...| .
BPUM_3194___c    139 NQSVILASLIGQPILQPLMKIHQSKQSKKKKNERLDQKGMFQIKQTDAII    188

BSNT_05389___    200 GMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS    240
                     ..:||||||:||||||::.|||.|.|.| |.||||||||||
BPUM_3194___c    189 QRDIILIDDIYTTGATIYDAARILKEAG-AKSVSSFTLIRS    228


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