Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05383 and BPUM_3188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence pep-align/BSNT_05383___yviE.1.24716.seq
# -bsequence pep-align/BPUM_3188.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05383___yviE-BPUM_3188.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05383___yviE-BPUM_3188.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05383___yviE
# 2: BPUM_3188
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 95/192 (49.5%)
# Similarity: 128/192 (66.7%)
# Gaps: 1/192 ( 0.5%)
# Score: 481.0
#
#
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BSNT_05383___ 1 MQIPRLIMHSVQGKIGLTTTPASLKMEQPQADLEIEQPSAEMEISVTPGK 50
||||||:|.....|:.::|||:..::|||:|||||:||.|.|.|..||.|
BPUM_3188 1 MQIPRLLMQQTYAKLQMSTTPSRQEVEQPRADLEIQQPKAVMNIKRTPSK 50
BSNT_05383___ 51 LTIDQTQAWEELDRKHVFKRIEEAAQQGHEDVMKGIARTAEEGDELMRIE 100
||||||:|:.::|.|.:|:|.||.|.:|...|.:|:.|.||||.||::||
BPUM_3188 51 LTIDQTEAFADMDIKSIFRRSEEWAAEGKRAVGEGMGRRAEEGSELIKIE 100
BSNT_05383___ 101 NKGNPIASQARRNSEMHQIQLGENYAPSLSRVKIQYTPSQLDVQITPRKP 150
|.||.||..|:.|......|......||...|||.|.||:|.:.:.|:|.
BPUM_3188 101 NGGNAIAEFAKINGAPPAKQFTIGVIPSFFSVKIHYQPSELQIDVEPQKA 150
BSNT_05383___ 151 VIQAEPHKPIVEYTPGNVKVDMLQYPDLNIDVEYPKESPEK- 191
:|:|.||||||.|.||.|.:||||||||.|:|:...::.:|
BPUM_3188 151 IIEATPHKPIVNYQPGKVNIDMLQYPDLKIEVDETGQNGDKV 192
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