Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05190 and BPUM_3080
See
DNA alignment /
Visit
BSNT_05190 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence pep-align/BSNT_05190___yveN.1.24716.seq
# -bsequence pep-align/BPUM_3080.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05190___yveN-BPUM_3080.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05190___yveN-BPUM_3080.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05190___yveN
# 2: BPUM_3080
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 212/381 (55.6%)
# Similarity: 273/381 (71.7%)
# Gaps: 2/381 ( 0.5%)
# Score: 1132.5
#
#
#=======================================
BSNT_05190___ 1 MTKKILFCATVDYHFKAFHLPYFKWFKQMGWEVHVAANGQTKLPYVDEKF 50
|.||:||||||||||:|||||||:||::.|||||.|||||.:|||||:..
BPUM_3080 1 MKKKVLFCATVDYHFQAFHLPYFRWFQEQGWEVHTAANGQLELPYVDQAH 50
BSNT_05190___ 51 SIPIRRSPFAPQNLAVYRQLKKVIDTYEYDIVHCHTPVGGVLARLAARQA 100
||||:||||...|...|.:|||::....||.:|||||:|.|:.||||:.|
BPUM_3080 51 SIPIQRSPFHVHNRLAYVELKKLLAKEHYDFIHCHTPMGSVIGRLAAKSA 100
BSNT_05190___ 101 RRHGTKVLYTAHGFHFCKGAPMKNWLLYYPVEKWLSAYTDCLITINEEDY 150
||.|||||||||||||.:|||::|||||||:|:||:.:||.|||||.||:
BPUM_3080 101 RRKGTKVLYTAHGFHFWQGAPLQNWLLYYPIERWLARHTDALITINGEDF 150
BSNT_05190___ 151 KRAKGLQRPGGRTQKIHGIGVNTERFRPVSPIEQQKLREKHGFRKDDFIL 200
|||..|.:.......:.|:||:.:||.||:..|:|:||..|||...|||:
BPUM_3080 151 KRADRLSKERASVYYVPGMGVDMKRFAPVNEKEKQRLRAVHGFSSADFIV 200
BSNT_05190___ 201 VYPAELNLNKNQKQLIEAAALLKEKIPSLRLVFAGEGAMEQTYQTLAEKL 250
:...|||.||||..||:|.|.|..|||::::||||||||..||:.|..:|
BPUM_3080 201 LCAGELNANKNQGMLIKACAKLYRKIPNVKIVFAGEGAMRPTYEKLVHEL 250
BSNT_05190___ 251 GASANVCFYGFCSDIHKLIQLADVSVASSIREGLGMNVLEGMAAEKPAIA 300
.....|.|.|||..|.:.:.|:||.|::|:|||||||:||.|:||||.||
BPUM_3080 251 HLEKQVQFAGFCKQIEEWMHLSDVCVSTSLREGLGMNLLEAMSAEKPVIA 300
BSNT_05190___ 301 TDNRGHREIIRDGENGFLIKIGDSAAFARRIEQLYHKPELCRKLGQEGRK 350
|:||||.|:||.|.||||:|..|....|..:.|||||.:....:|:.||.
BPUM_3080 301 TENRGHCELIRHGVNGFLVKTHDVNDLAEYLHQLYHKRDQLPLMGKAGRS 350
BSNT_05190___ 351 TALRFSEARTVEEMADIYSAYMDMDIKEKSV 381
.|..|::.:||..|.:||:.|||. .||.:
BPUM_3080 351 LAHAFAQEQTVSAMEEIYTTYMDQ--AEKVM 379
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.