Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04821 and BPUM_2907

See DNA alignment / Visit BSNT_04821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence pep-align/BSNT_04821___yurI.1.24716.seq
#    -bsequence pep-align/BPUM_2907___end1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04821___yurI-BPUM_2907___end1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04821___yurI-BPUM_2907___end1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04821___yurI
# 2: BPUM_2907___end1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     184/296 (62.2%)
# Similarity:   214/296 (72.3%)
# Gaps:          12/296 ( 4.1%)
# Score: 966.0
# 
#
#=======================================

BSNT_04821___      1 MTKKAWFLPLVCVLLISGWL-APAASASAQTALSLNDRLASSPSGTGSLL     49
                      .|:..|..:...::|.|.| ||...|:.....:||:   .|.:.|.|.|
BPUM_2907___e      1 -MKRTLFGTVAAGIMIFGTLAAPLPQAANAQNFTLNE---PSQTITFSPL     46

BSNT_04821___     50 SL-------AAPAAPYADTDTYYEGAEGKTGDSLKSTLHRIISGHTMLSY     92
                     .|       .|.....:..|:||:.|.||:|.:||..||.||..|..|||
BPUM_2907___e     47 QLQNETSAQQAKTTASSQIDSYYQSANGKSGPALKKALHDIIDDHKQLSY     96

BSNT_04821___     93 SEVWNALKETDEDPRNPNNVILLYTNESRSKNLNGGNVGDWNREHVWAKS    142
                     |:||:|||:|||||:|||||:|||:..||||..||||||.||||||||||
BPUM_2907___e     97 SQVWDALKKTDEDPKNPNNVLLLYSGVSRSKQSNGGNVGQWNREHVWAKS    146

BSNT_04821___    143 HGDFGTSKGPGTDIHHLRPADVQVNSARGNMDFDNGGTEYAKAPGNYYDG    192
                     ||:||||:|||||:||||..|||.||.|||:|||.||.||..||||:||.
BPUM_2907___e    147 HGNFGTSQGPGTDLHHLRATDVQTNSTRGNLDFDMGGNEYKGAPGNFYDS    196

BSNT_04821___    193 DSWEPRDDVKGDVARMLFYMAVRYEGDDGYPDLELNDKTGNGSAPYHGKQ    242
                     ||:||...||||||||||||||||||||.:||||||||..|||||.|||.
BPUM_2907___e    197 DSFEPHSRVKGDVARMLFYMAVRYEGDDRFPDLELNDKVNNGSAPLHGKM    246

BSNT_04821___    243 SVLLEWNKQDPVDDRERKRNEIIYEKYQHNRNPFIDHPEWADEIWP    288
                     ||||:|:||||||..||.||||||:.||:||||||||||||.|||.
BPUM_2907___e    247 SVLLKWHKQDPVDQIERNRNEIIYQTYQNNRNPFIDHPEWASEIWE    292


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