Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04774 and BPUM_2888

See DNA alignment / Visit BSNT_04774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_04774___hom.1.24716.seq
#    -bsequence pep-align/BPUM_2888___thrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04774___hom-BPUM_2888___thrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04774___hom-BPUM_2888___thrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04774___hom
# 2: BPUM_2888___thrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity:     356/433 (82.2%)
# Similarity:   407/433 (94.0%)
# Gaps:           0/433 ( 0.0%)
# Score: 1877.0
# 
#
#=======================================

BSNT_04774___      1 MKAIRVGLLGLGTVGSGVVKIIQDHQDKLMHQVGCPVTIKKVLVKDLEKK     50
                     ||||||||||||||||||||||||||||||||:||||.|:||||.:.:||
BPUM_2888___t      1 MKAIRVGLLGLGTVGSGVVKIIQDHQDKLMHQIGCPVLIQKVLVSNPDKK     50

BSNT_04774___     51 REVDLPKEVLTTEVYDVIDDPDVDVVIEVIGGVEQTKQYLVDALRSKKHV    100
                     |:||:.:||.||||||||.||:|||:|||:||:|:|||||:|||..||||
BPUM_2888___t     51 RDVDVAREVFTTEVYDVIRDPEVDVIIEVMGGIEETKQYLIDALNEKKHV    100

BSNT_04774___    101 VTANKDLMAVYGSELLAEAKENGCDIYFEASVAGGIPILRTLEEGLSSDR    150
                     :||||||||:||:|||..|||||||:|:||||||||||||||||||:|||
BPUM_2888___t    101 ITANKDLMALYGTELLHVAKENGCDLYYEASVAGGIPILRTLEEGLASDR    150

BSNT_04774___    151 ITKMMGIVNGTTNFILTKMIKEKSPYEEVLKEAQDLGFAEADPTSDVEGL    200
                     |||||||||||||||||||..:||.||:||||||||||||:|||:|||||
BPUM_2888___t    151 ITKMMGIVNGTTNFILTKMNVDKSAYEDVLKEAQDLGFAESDPTADVEGL    200

BSNT_04774___    201 DAARKMAILARLGFSMNVDLEDVKVKGISQITDEDISFSKRLGYTMKLIG    250
                     ||||||||||||||||||:||||||:|||.::||||:||||.||||||||
BPUM_2888___t    201 DAARKMAILARLGFSMNVELEDVKVRGISDVSDEDINFSKRFGYTMKLIG    250

BSNT_04774___    251 IAQRDGSKIEVSVQPTLLPDHHPLSAVHNEFNAVYVYGEAVGETMFYGPG    300
                     ||||||.|:||||||||||||||||:|:||||||||||.|||||||||||
BPUM_2888___t    251 IAQRDGEKVEVSVQPTLLPDHHPLSSVNNEFNAVYVYGSAVGETMFYGPG    300

BSNT_04774___    301 AGSMPTATSVVSDLVAVMKNMRLGVTGNSFVGPQYEKNMKSPSDIYAQQF    350
                     |||:||||:||||||||||||||||.|:.|:.||:||.:||||:::||||
BPUM_2888___t    301 AGSLPTATAVVSDLVAVMKNMRLGVNGSGFIAPQFEKKIKSPSEVFAQQF    350

BSNT_04774___    351 LRIHVKDEVGSFSKITSVFSERGVSFEKILQLPIKGHDELAEIVIVTHHT    400
                     |||||:|:||:||:|||:|||||:|||||||||:|||||||||||:||.|
BPUM_2888___t    351 LRIHVRDQVGAFSRITSIFSERGISFEKILQLPVKGHDELAEIVIITHRT    400

BSNT_04774___    401 SEADFSDILQNLNDLEVVQEVKSTYRVEGNGWS    433
                     ||.|||:|||.||||:||.:|||||||||||.|
BPUM_2888___t    401 SEEDFSNILQKLNDLDVVVQVKSTYRVEGNGLS    433


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