Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04651 and BPUM_2829

See DNA alignment / Visit BSNT_04651 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence pep-align/BSNT_04651___mrpA.1.24716.seq
#    -bsequence pep-align/BPUM_2829___mrpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04651___mrpA-BPUM_2829___mrpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04651___mrpA-BPUM_2829___mrpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04651___mrpA
# 2: BPUM_2829___mrpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 803
# Identity:     576/803 (71.7%)
# Similarity:   672/803 (83.7%)
# Gaps:           4/803 ( 0.5%)
# Score: 3026.5
# 
#
#=======================================

BSNT_04651___      1 MQLLHLAILSPFLFAFIIPFLAKYAKRVHTGWFVLILPVLLFIYFLPMIR     50
                     |||:|.|||||||.||::|||.||.||:||||||||||:|||.||:.|:.
BPUM_2829___m      1 MQLIHFAILSPFLLAFVVPFLFKYVKRIHTGWFVLILPILLFSYFVQMMT     50

BSNT_04651___     51 MTQSGETLRSVLEWIPSLGINFTVYIDGLGLLFALLITGIGSLVTLYSIF    100
                     ||.:|.||.|.:|||||||:|||||:|||.|||||||||||:||.|||||
BPUM_2829___m     51 MTSNGRTLFSQVEWIPSLGMNFTVYVDGLSLLFALLITGIGALVVLYSIF    100

BSNT_04651___    101 YLSKEKEQLGPFYVYLLMFMGAMLGVVLVDNVMVLYMFWELTSLSSFLLI    150
                     ||||||||||.||.||||||.|||||||.||::|||:||||||:||||||
BPUM_2829___m    101 YLSKEKEQLGSFYTYLLMFMTAMLGVVLSDNMVVLYLFWELTSISSFLLI    150

BSNT_04651___    151 GYWYKREKSRYGAAKSLLITVSGGLCMLGGFILLYLITDSFSIREMVHQV    200
                     ||||||::|||||.|||||||.|||.|||||||||||||||||||.|:|:
BPUM_2829___m    151 GYWYKRDRSRYGATKSLLITVFGGLAMLGGFILLYLITDSFSIREAVNQL    200

BSNT_04651___    201 QLIAGHELFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSA    250
                     |||.....||||||||||||||||||||||||||||||||||||:|||||
BPUM_2829___m    201 QLIMASPYFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSSYLHSA    250

BSNT_04651___    251 TMVKAGIYVIARFSPIFAFSAQWFWIVSLVGLFTMVWGSFHAVKQTDLKS    300
                     ||||||||::||||||||.|..|||.:|:|||.|:.|||||||:|.|||:
BPUM_2829___m    251 TMVKAGIYLVARFSPIFAISEVWFWTISIVGLVTLFWGSFHAVRQNDLKA    300

BSNT_04651___    301 ILAFSTVSQLGMIISMLGVSAAALHYGHTEYYTVAAMAAIFHLINHATFK    350
                     |||||||||||||:.||||.|||:|.....|:..|.:|||||||||||||
BPUM_2829___m    301 ILAFSTVSQLGMIMLMLGVGAAAIHENEPAYFGAAVLAAIFHLINHATFK    350

BSNT_04651___    351 GSLFMAVGIIDHETGTRDIRKLGGLMAIMPITFTISLIGTFSMAGLPPFN    400
                     ||||||.|||||||||||||||||||.||||||||:||||||||||||||
BPUM_2829___m    351 GSLFMAAGIIDHETGTRDIRKLGGLMTIMPITFTITLIGTFSMAGLPPFN    400

BSNT_04651___    401 GFLSKEMFFTSMLRVTHFDLFNVQTWGVLFPLFAWIGSVFTFIYSMKLLF    450
                     ||||||:|||||:|::.....::.|||.:||..||:.|||||||||.|||
BPUM_2829___m    401 GFLSKELFFTSMIRISEISFTDISTWGAIFPAIAWLASVFTFIYSMMLLF    450

BSNT_04651___    451 KTFRGNYQPEQLEKPAHEAPVGMLVPPVILVALAVSLFFFPNILSYSLIE    500
                     |||||:.|.:||||..||||:|||:||:||.||.|:.|||||||:||:||
BPUM_2829___m    451 KTFRGHLQLDQLEKKPHEAPIGMLIPPIILAALVVTFFFFPNILAYSVIE    500

BSNT_04651___    501 PAMNSIYPTLLAGHEKFHVHISQWHGVTTELLMTAGIVVIGTIGYLSLNK    550
                     ||:.:|.|..:...::|.|.|..|||...||.||.|:|.:|.||||:|:|
BPUM_2829___m    501 PAIAAIIPDAIDPGKRFVVKIEAWHGFQPELYMTMGVVALGIIGYLTLSK    550

BSNT_04651___    551 WKGIYKLFPSKLTLNRLYDKLLTLMEKGSYRITKQYMTGFLRDYLLYIFA    600
                     |:.||.:|..|.:.|.|||:.|..:||||||:|..||||||||||:|:|.
BPUM_2829___m    551 WRPIYNIFKKKWSFNSLYDRSLIGLEKGSYRLTSSYMTGFLRDYLVYVFG    600

BSNT_04651___    601 GFIILIGGAFAIKGGFSFKTEGMAKIGVYEIILTLVMISATVATVFARSR    650
                     ..||::||....:..|||..:..|.||.||:||:||||:||:.|||||||
BPUM_2829___m    601 FMIIVLGGVMFYQNAFSFNMKNAAPIGTYEVILSLVMIAATLTTVFARSR    650

BSNT_04651___    651 LTAIIALGVVGYTLALFFVIFRAPDLALTQLVIETISVALFLLCFYHLPK    700
                     |||||.|||:||||:||||||||||||||||:|||||||||||||||||:
BPUM_2829___m    651 LTAIIGLGVMGYTLSLFFVIFRAPDLALTQLIIETISVALFLLCFYHLPQ    700

BSNT_04651___    701 LRLKTKTRTFRMTNFIISLGVGIIVTLLGIASSSQRTKDSIASFFVKHSH    750
                     |.:|.|||.|:|||.|||:|||:|||.|..||:|.::.|:|||:|:::|:
BPUM_2829___m    701 LSMKQKTRKFKMTNLIISVGVGVIVTCLAFASTSNQSLDTIASYFIENSY    750

BSNT_04651___    751 DLGGGDNVVNVILVDFRGFDTMFEITVLTIAALGIYSMIKTKVKEEGKSG    800
                     .|.||:|:||||||||||||||||||||.|||||||.::||:.|.  |.|
BPUM_2829___m    751 KLAGGNNIVNVILVDFRGFDTMFEITVLAIAALGIYGLLKTQGKR--KRG    798

BSNT_04651___    801 E--    801
                     .  
BPUM_2829___m    799 VRR    801


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04651 and BPUM_2829

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
