Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04599 and BPUM_2789
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:15
# Commandline: needle
# -asequence pep-align/BSNT_04599___mcpB.1.24716.seq
# -bsequence pep-align/BPUM_2789.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04599___mcpB-BPUM_2789.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04599___mcpB-BPUM_2789.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04599___mcpB
# 2: BPUM_2789
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 390/664 (58.7%)
# Similarity: 509/664 (76.7%)
# Gaps: 3/664 ( 0.5%)
# Score: 1930.0
#
#
#=======================================
BSNT_04599___ 1 MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMG 50
|...|.||||||||||||::|:.:||:|...|..|::.::..:||::|||
BPUM_2789 1 MGKMIQWLKKPSISKKLIMAFLVVLILPTTALTISAFFTSKTELDKQIMG 50
BSNT_04599___ 51 NAKNSVDTFNTTVTNDLGEKAKAVTFFSESLKRSAFKGKSNQEEIKAKFS 100
:|.:.|:.|:|.:..::|.||.||..|::|||.|..:.|:....|| :..
BPUM_2789 51 SAMSQVNAFDTLINENIGNKADAVALFTDSLKASNLQEKNRSATIK-ELQ 99
BSNT_04599___ 101 QYVSINQ-GVARIYGGADNGTYVQAPKEKLPDGYDPRQRPWYQDAMKAG- 148
|:..||: .|:.||.|::.|.::|.|.:|:|||||||:|||||:|:|||
BPUM_2789 100 QFGKINEKDVSAIYAGSEKGLFMQYPVQKMPDGYDPRERPWYQEALKAGN 149
BSNT_04599___ 149 GEIVVTDPYVAASDGSMVITIAQELKDGSGVVAMDITIDKLLEQMKQIKV 198
|:.|:|.||||||.|.|||||.|::||||||:.:|:.||.|::::|:||:
BPUM_2789 150 GKQVITKPYVAASTGKMVITITQKMKDGSGVIGLDMEIDTLIQKLKEIKI 199
BSNT_04599___ 199 GKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGELQYTLNNE 248
|::|||||..|:||.:|....|||.:::.:....:|.|..|...|||.:.
BPUM_2789 200 GQKGYAFIMEKDKTVLADPTEKAGSQVNENLAKIIYQNKEGSGSYTLKDI 249
BSNT_04599___ 249 DKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGIL 298
|||:.|.|||||||||.|||.:.|::||:|.|..|.:||...:::..|.|
BPUM_2789 250 DKKVAYVTNELTGWKIGGTMLVSEVEDAAKPVFHTALIVFSVTLIVAGTL 299
BSNT_04599___ 299 ILFIVRSITKPLKRLVQSSKTISRGDLTETIEIHSKDELGELGESFNEMG 348
|.||||||:|.|..|.:.||.:|.|||.:.::|.|.||:|::|:.||.|.
BPUM_2789 300 IFFIVRSISKRLSNLARFSKKVSEGDLRDKLQIQSDDEIGQVGKGFNTMI 349
BSNT_04599___ 349 QSLRSLISAIQDSVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNE 398
.|||:||.|:|.||.|||:|||:||||||||||||||||:||||||||||
BPUM_2789 350 DSLRTLIGAVQTSVENVASSSEELTASAGQTSKATEHITLAIEQFSNGNE 399
BSNT_04599___ 399 EQSEKVESSSHQLNLMNEGLQQVSQTSSDITKASIQSTEIAGTGEKFVQQ 448
.|::||||||.:|:.||.|||.:::::..||.:||:||:|||.|.:.|::
BPUM_2789 400 SQNDKVESSSEELDEMNRGLQHMNESAESITASSIKSTDIAGEGGQLVEK 449
BSNT_04599___ 449 TVGQMNSINQSVQQAEAVVKGLEGKSKDITSILRVINGIADQTNLLALNA 498
|..|||.|:|||::||.|:..||.||||||.||.||||||||||||||||
BPUM_2789 450 TASQMNVIDQSVKKAENVISALESKSKDITQILGVINGIADQTNLLALNA 499
BSNT_04599___ 499 AIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIETSL 548
|||||||||||||||||||||||||||||:||||||.||:|||.:|:.|.
BPUM_2789 500 AIEAARAGESGRGFSVVAEEVRKLAVQSANSAKEIENLIKEIVQDIDVSQ 549
BSNT_04599___ 549 HMFKEVNQEVQSGLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSD 598
.:|..||:||||||..|:.|:.||.:||..|.||:.||||||.||.|||:
BPUM_2789 550 EVFTAVNREVQSGLSFTEQTRVSFHNIFETTKEISDKLQTMNQTVVQLSN 599
BSNT_04599___ 599 RSQHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISSSATTLAQM 648
.|.|||.||..|||||:||||:|||||||||||||||||||||:.||:.|
BPUM_2789 600 GSAHVSEAVREIADVSRESSANIQDIAASAEEQLASMEEISSSSATLSSM 649
BSNT_04599___ 649 AEELRDLTKQFKIE 662
|||||||..:||:|
BPUM_2789 650 AEELRDLISKFKVE 663
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